RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W YDR514CQ04408 483 aa1.58□□□□□ -2.16
BFR2YDR299W REH1Q06709 432 aa1.58□□□□□ -2.16
BFR2YDR299W YDL124WQ07551 312 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W THI21Q08975 551 aa1.58□□□□□ -2.16
BFR2YDR299W WRS1Q12109 432 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W OSH2Q12451 1283 aa1.58□□□□□ -2.16
BFR2YDR299W YKL033W-AQ86ZR7 236 aa1.58□□□□□ -2.16
BFR2YDR299W DIF1O13577 133 aa1.58□□□□□ -2.16
BFR2YDR299W GRX1P25373 110 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W RPL8BP29453 256 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W CCR4P31384 837 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W GAT1P43574 510 aa1.58□□□□□ -2.16
BFR2YDR299W UBP6P43593 499 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W PRP31P49704 494 aaPredicted RBP1.58□□□□□ -2.16
BFR2YDR299W SCS3P53012 380 aa1.58□□□□□ -2.16
BFR2YDR299W CTK1Q03957 528 aaKnown RBP1.58□□□□□ -2.16
BFR2YDR299W ERG11P10614 530 aa1.57□□□□□ -2.16
BFR2YDR299W HSP60P19882 572 aaKnown RBP1.57□□□□□ -2.16
BFR2YDR299W VPS34P22543 875 aa1.57□□□□□ -2.16
BFR2YDR299W PTP1P25044 335 aa1.57□□□□□ -2.16
BFR2YDR299W APT2P36973 181 aa1.57□□□□□ -2.16
BFR2YDR299W FMO1P38866 432 aa1.57□□□□□ -2.16
BFR2YDR299W RLP7P40693 322 aaKnown RBP1.57□□□□□ -2.16
BFR2YDR299W BAP3P41815 604 aa1.57□□□□□ -2.16
BFR2YDR299W ZDS1P50111 915 aaKnown RBP1.57□□□□□ -2.16
BFR2YDR299W ZIP2P53061 704 aa1.57□□□□□ -2.16
BFR2YDR299W MTL1P53214 551 aa1.57□□□□□ -2.16
BFR2YDR299W YGR283CP53336 341 aaPredicted RBP1.57□□□□□ -2.16
BFR2YDR299W SEG1Q04279 960 aa1.57□□□□□ -2.16
BFR2YDR299W GPR1Q12361 961 aa1.57□□□□□ -2.16
BFR2YDR299W SIR3P06701 978 aa1.56□□□□□ -2.16
BFR2YDR299W PHO11P35842 467 aa1.56□□□□□ -2.16
BFR2YDR299W PHO12P38693 467 aa1.56□□□□□ -2.16
BFR2YDR299W NUP60P39705 539 aa1.56□□□□□ -2.16
BFR2YDR299W ECM1P39715 212 aa1.56□□□□□ -2.16
BFR2YDR299W HUL4P40985 892 aa1.56□□□□□ -2.16
BFR2YDR299W YGR125WP53273 1036 aa1.56□□□□□ -2.16
BFR2YDR299W SLK19Q08581 821 aaKnown RBP1.56□□□□□ -2.16
BFR2YDR299W MET7Q08645 548 aa1.56□□□□□ -2.16
BFR2YDR299W OSW1Q08692 278 aa1.56□□□□□ -2.16
BFR2YDR299W USV1Q12132 391 aa1.56□□□□□ -2.16
BFR2YDR299W SSF2Q12153 453 aaPredicted RBP1.56□□□□□ -2.16
BFR2YDR299W YBR182C-AQ8TGU6 64 aa1.56□□□□□ -2.16
BFR2YDR299W PHR1P05066 565 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
BFR2YDR299W RAD4P14736 754 aa1.55□□□□□ -2.16
BFR2YDR299W RPA135P22138 1203 aaKnown RBP1.55□□□□□ -2.16
BFR2YDR299W PER1P25625 357 aa1.55□□□□□ -2.16
BFR2YDR299W YHR112CP38716 378 aa1.55□□□□□ -2.16
BFR2YDR299W MUP3P38734 546 aa1.55□□□□□ -2.16
BFR2YDR299W HRB1P38922 454 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
BFR2YDR299W PAC2P39937 518 aa1.55□□□□□ -2.16
BFR2YDR299W ALG2P43636 503 aa1.55□□□□□ -2.16
BFR2YDR299W ALY2P47029 1046 aa1.55□□□□□ -2.16
BFR2YDR299W TIM54P47045 478 aa1.55□□□□□ -2.16
BFR2YDR299W ATG4P53867 494 aa1.55□□□□□ -2.16
BFR2YDR299W FMP30Q02883 468 aa1.55□□□□□ -2.16
BFR2YDR299W CIT1P00890 479 aa1.55□□□□□ -2.16
BFR2YDR299W NUP1P20676 1076 aa1.55□□□□□ -2.16
BFR2YDR299W ADE2P21264 571 aaKnown RBP1.55□□□□□ -2.16
BFR2YDR299W APL2P36000 726 aaPredicted RBP1.55□□□□□ -2.16
BFR2YDR299W TRZ1P36159 838 aaPredicted RBP1.55□□□□□ -2.16
BFR2YDR299W UBS1P38290 277 aa1.55□□□□□ -2.16
BFR2YDR299W XBP1P40489 647 aa1.55□□□□□ -2.16
BFR2YDR299W NET1P47035 1189 aa1.55□□□□□ -2.16
BFR2YDR299W MRK1P50873 501 aa1.55□□□□□ -2.16
BFR2YDR299W FHN1P53279 174 aa1.55□□□□□ -2.16
BFR2YDR299W ORC4P54791 529 aa1.55□□□□□ -2.16
BFR2YDR299W RGT2Q12300 763 aa1.55□□□□□ -2.16
BFR2YDR299W ZRT2Q12436 422 aa1.55□□□□□ -2.16
BFR2YDR299W YLR149CQ99296 730 aa1.55□□□□□ -2.16
BFR2YDR299W STE12P13574 688 aa1.54□□□□□ -2.16
BFR2YDR299W THR1P17423 357 aaKnown RBP1.54□□□□□ -2.16
BFR2YDR299W KCC4P25389 1037 aa1.54□□□□□ -2.16
BFR2YDR299W FUB1P25659 250 aa1.54□□□□□ -2.16
BFR2YDR299W GMH1P36125 273 aa1.54□□□□□ -2.16
BFR2YDR299W LYS9P38999 446 aa1.54□□□□□ -2.16
BFR2YDR299W YFL052WP43551 465 aa1.54□□□□□ -2.16
BFR2YDR299W BNA3P47039 444 aaKnown RBP1.54□□□□□ -2.16
BFR2YDR299W SPC98P53540 846 aa1.54□□□□□ -2.16
BFR2YDR299W MCM21Q06675 368 aa1.54□□□□□ -2.16
BFR2YDR299W MLH3Q12083 715 aa1.54□□□□□ -2.16
BFR2YDR299W CLF1Q12309 687 aaPredicted RBP1.54□□□□□ -2.16
BFR2YDR299W BET3P36149 193 aa1.53□□□□□ -2.16
BFR2YDR299W CRP1P38845 465 aaKnown RBP1.53□□□□□ -2.16
BFR2YDR299W LTP1P40347 161 aa1.53□□□□□ -2.16
BFR2YDR299W SNU71P53207 620 aaKnown RBP1.53□□□□□ -2.16
BFR2YDR299W MPS1P54199 764 aa1.53□□□□□ -2.16
BFR2YDR299W ARG5,6Q01217 863 aa1.53□□□□□ -2.16
BFR2YDR299W ATP25Q03153 612 aa1.53□□□□□ -2.16
BFR2YDR299W TAF8Q03750 510 aa1.53□□□□□ -2.16
BFR2YDR299W YDR338CQ05497 695 aa1.53□□□□□ -2.16
BFR2YDR299W HRP1Q99383 534 aaKnown RBP1.53□□□□□ -2.16
BFR2YDR299W PGK1P00560 416 aaKnown RBP1.52□□□□□ -2.17
BFR2YDR299W ABF1P14164 731 aa1.52□□□□□ -2.17
BFR2YDR299W ERG6P25087 383 aaKnown RBP1.52□□□□□ -2.17
BFR2YDR299W SET3P36124 751 aa1.52□□□□□ -2.17
BFR2YDR299W GET2P40056 285 aa1.52□□□□□ -2.17
BFR2YDR299W HXT16P47185 567 aa1.52□□□□□ -2.17
BFR2YDR299W COX18P53239 316 aa1.52□□□□□ -2.17
BFR2YDR299W RGC1Q06108 1083 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms