RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C ADE2P21264 571 aaKnown RBP2.99□□□□□ -1.93
PCF11YDR228C APL2P36000 726 aaPredicted RBP2.99□□□□□ -1.93
PCF11YDR228C YHR112CP38716 378 aa2.99□□□□□ -1.93
PCF11YDR228C LYS9P38999 446 aa2.99□□□□□ -1.93
PCF11YDR228C CCT3P39077 534 aaKnown RBP2.99□□□□□ -1.93
PCF11YDR228C ALY2P47029 1046 aa2.99□□□□□ -1.93
PCF11YDR228C BNA2P47125 453 aa2.99□□□□□ -1.93
PCF11YDR228C YAP1802P53309 568 aa2.99□□□□□ -1.93
PCF11YDR228C ARG5,6Q01217 863 aa2.99□□□□□ -1.93
PCF11YDR228C RPN4Q03465 531 aa2.99□□□□□ -1.93
PCF11YDR228C GAD1Q04792 585 aa2.99□□□□□ -1.93
PCF11YDR228C MDM12Q92328 271 aa2.99□□□□□ -1.93
PCF11YDR228C YLR149CQ99296 730 aa2.99□□□□□ -1.93
PCF11YDR228C ERR1P0CX10 437 aa2.98□□□□□ -1.93
PCF11YDR228C ERR2P0CX11 437 aa2.98□□□□□ -1.93
PCF11YDR228C HIS7P33734 552 aaKnown RBP2.98□□□□□ -1.93
PCF11YDR228C MIP6P38760 659 aaKnown RBP2.98□□□□□ -1.93
PCF11YDR228C GID8P40208 455 aa2.98□□□□□ -1.93
PCF11YDR228C BUD6P41697 788 aa2.98□□□□□ -1.93
PCF11YDR228C CCT7P42943 550 aaKnown RBP2.98□□□□□ -1.93
PCF11YDR228C CAF16P43569 289 aa2.98□□□□□ -1.93
PCF11YDR228C PRP31P49704 494 aaPredicted RBP2.98□□□□□ -1.93
PCF11YDR228C HMO1Q03973 246 aaKnown RBP2.98□□□□□ -1.93
PCF11YDR228C YOL098CQ12496 1037 aa2.98□□□□□ -1.93
PCF11YDR228C BNR1P40450 1375 aa2.98□□□□□ -1.93
PCF11YDR228C MIH1P23748 554 aa2.97□□□□□ -1.93
PCF11YDR228C ILV6P25605 309 aaKnown RBP2.97□□□□□ -1.93
PCF11YDR228C FLO10P36170 1169 aa2.97□□□□□ -1.93
PCF11YDR228C YKL033W-AQ86ZR7 236 aa2.97□□□□□ -1.93
PCF11YDR228C PYC1P11154 1178 aaKnown RBP2.96□□□□□ -1.93
PCF11YDR228C KIN3P22209 435 aa2.96□□□□□ -1.93
PCF11YDR228C OCA5P38738 679 aa2.96□□□□□ -1.93
PCF11YDR228C REV7P38927 245 aa2.96□□□□□ -1.93
PCF11YDR228C YIL166CP40445 542 aa2.96□□□□□ -1.93
PCF11YDR228C YBP2P53169 641 aa2.96□□□□□ -1.93
PCF11YDR228C MTL1P53214 551 aa2.96□□□□□ -1.93
PCF11YDR228C FHN1P53279 174 aa2.96□□□□□ -1.93
PCF11YDR228C LGE1Q02796 332 aaKnown RBP2.96□□□□□ -1.93
PCF11YDR228C MCM21Q06675 368 aa2.96□□□□□ -1.93
PCF11YDR228C HRP1Q99383 534 aaKnown RBP2.96□□□□□ -1.93
PCF11YDR228C CDC43P18898 376 aa2.96□□□□□ -1.94
PCF11YDR228C HCA4P20448 770 aaKnown RBP2.96□□□□□ -1.94
PCF11YDR228C STO1P34160 861 aaKnown RBP2.96□□□□□ -1.94
PCF11YDR228C FMO1P38866 432 aa2.96□□□□□ -1.94
PCF11YDR228C NUP60P39705 539 aa2.96□□□□□ -1.94
PCF11YDR228C PAN2P53010 1115 aaPredicted RBP2.96□□□□□ -1.94
PCF11YDR228C SNP1Q00916 300 aaPredicted RBP2.96□□□□□ -1.94
PCF11YDR228C COQ11Q05892 277 aa2.96□□□□□ -1.94
PCF11YDR228C CDC9P04819 755 aa2.95□□□□□ -1.94
PCF11YDR228C TUB1P09733 447 aaKnown RBP2.95□□□□□ -1.94
PCF11YDR228C ERG6P25087 383 aaKnown RBP2.95□□□□□ -1.94
PCF11YDR228C ADY2P25613 283 aa2.95□□□□□ -1.94
PCF11YDR228C EMP70P32802 667 aa2.95□□□□□ -1.94
PCF11YDR228C TRZ1P36159 838 aaPredicted RBP2.95□□□□□ -1.94
PCF11YDR228C RIX1P38883 763 aaPredicted RBP2.95□□□□□ -1.94
PCF11YDR228C HRB1P38922 454 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
PCF11YDR228C NDC80P40460 691 aa2.95□□□□□ -1.94
PCF11YDR228C CTK1Q03957 528 aaKnown RBP2.95□□□□□ -1.94
PCF11YDR228C RGC1Q06108 1083 aaKnown RBP2.95□□□□□ -1.94
PCF11YDR228C ARO10Q06408 635 aa2.95□□□□□ -1.94
PCF11YDR228C Q0142Q9ZZW4 58 aa2.95□□□□□ -1.94
PCF11YDR228C MET6P05694 767 aaKnown RBP2.94□□□□□ -1.94
PCF11YDR228C DMC1P25453 334 aa2.94□□□□□ -1.94
PCF11YDR228C TIM23P32897 222 aa2.94□□□□□ -1.94
PCF11YDR228C YKR018CP36114 725 aa2.94□□□□□ -1.94
PCF11YDR228C CBR1P38626 284 aaKnown RBP2.94□□□□□ -1.94
PCF11YDR228C YJL206CP39529 758 aa2.94□□□□□ -1.94
PCF11YDR228C MLH3Q12083 715 aa2.94□□□□□ -1.94
PCF11YDR228C MEF1P25039 761 aa2.94□□□□□ -1.94
PCF11YDR228C PPZ2P33329 710 aa2.94□□□□□ -1.94
PCF11YDR228C PBP2P38151 413 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
PCF11YDR228C SFB3P38810 929 aa2.94□□□□□ -1.94
PCF11YDR228C IMO32P53219 342 aa2.94□□□□□ -1.94
PCF11YDR228C ORC4P54791 529 aa2.94□□□□□ -1.94
PCF11YDR228C YOR131CQ12486 218 aa2.94□□□□□ -1.94
PCF11YDR228C SRP40P32583 406 aaPredicted RBP2.93□□□□□ -1.94
PCF11YDR228C PHO11P35842 467 aa2.93□□□□□ -1.94
PCF11YDR228C YKR051WP36142 418 aa2.93□□□□□ -1.94
PCF11YDR228C PHO12P38693 467 aa2.93□□□□□ -1.94
PCF11YDR228C GET2P40056 285 aa2.93□□□□□ -1.94
PCF11YDR228C ARG2P40360 574 aa2.93□□□□□ -1.94
PCF11YDR228C YFL052WP43551 465 aa2.93□□□□□ -1.94
PCF11YDR228C NPY1P53164 384 aa2.93□□□□□ -1.94
PCF11YDR228C ATG4P53867 494 aa2.93□□□□□ -1.94
PCF11YDR228C PEX1P24004 1043 aa2.92□□□□□ -1.94
PCF11YDR228C MVD1P32377 396 aaKnown RBP2.92□□□□□ -1.94
PCF11YDR228C HOG1P32485 435 aa2.92□□□□□ -1.94
PCF11YDR228C SEC6P32844 805 aa2.92□□□□□ -1.94
PCF11YDR228C GLG1P36143 616 aa2.92□□□□□ -1.94
PCF11YDR228C RPN10P38886 268 aaKnown RBP2.92□□□□□ -1.94
PCF11YDR228C BDH2P39713 417 aa2.92□□□□□ -1.94
PCF11YDR228C ARP4P80428 489 aa2.92□□□□□ -1.94
PCF11YDR228C REC102Q02721 264 aa2.92□□□□□ -1.94
PCF11YDR228C NHX1Q04121 633 aa2.92□□□□□ -1.94
PCF11YDR228C YNL162W-AQ3E7A8 72 aa2.92□□□□□ -1.94
PCF11YDR228C SRD1P09007 221 aa2.92□□□□□ -1.94
PCF11YDR228C RNR1P21524 888 aaKnown RBP2.92□□□□□ -1.94
PCF11YDR228C VBA3P25594 458 aa2.92□□□□□ -1.94
PCF11YDR228C MSH2P25847 964 aa2.92□□□□□ -1.94
PCF11YDR228C APT2P36973 181 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms