RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A PRS5Q12265 496 aaKnown RBP1.36□□□□□ -2.19
TFB5YDR079C-A DUT1P33317 147 aa1.35□□□□□ -2.19
TFB5YDR079C-A PIN4P34217 668 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
TFB5YDR079C-A EXO84P38261 753 aa1.35□□□□□ -2.19
TFB5YDR079C-A NMD5P46970 1048 aa1.35□□□□□ -2.19
TFB5YDR079C-A ATP23P53722 227 aa1.35□□□□□ -2.19
TFB5YDR079C-A HAL9Q12180 1030 aa1.35□□□□□ -2.19
TFB5YDR079C-A OAF1P39720 1047 aaPredicted RBP1.34□□□□□ -2.19
TFB5YDR079C-A GUS1P46655 708 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
TFB5YDR079C-A MTL1P53214 551 aa1.34□□□□□ -2.19
TFB5YDR079C-A SPC98P53540 846 aa1.34□□□□□ -2.19
TFB5YDR079C-A RTT103Q05543 409 aa1.34□□□□□ -2.19
TFB5YDR079C-A SRL1Q08673 210 aa1.34□□□□□ -2.19
TFB5YDR079C-A GPR1Q12361 961 aa1.34□□□□□ -2.19
TFB5YDR079C-A RPS9AO13516 197 aaKnown RBP1.33□□□□□ -2.2
TFB5YDR079C-A YBR259WP38338 688 aa1.33□□□□□ -2.2
TFB5YDR079C-A LYS9P38999 446 aa1.33□□□□□ -2.2
TFB5YDR079C-A NUP60P39705 539 aa1.33□□□□□ -2.2
TFB5YDR079C-A THI12P42883 340 aa1.33□□□□□ -2.2
TFB5YDR079C-A THI5P43534 340 aa1.33□□□□□ -2.2
TFB5YDR079C-A SNO3P43544 222 aa1.33□□□□□ -2.2
TFB5YDR079C-A SSY5P47002 699 aa1.33□□□□□ -2.2
TFB5YDR079C-A THI11P47183 340 aa1.33□□□□□ -2.2
TFB5YDR079C-A RSC9Q03124 581 aa1.33□□□□□ -2.2
TFB5YDR079C-A THI13Q07748 340 aa1.33□□□□□ -2.2
TFB5YDR079C-A YIL169CP40442 995 aa1.32□□□□□ -2.2
TFB5YDR079C-A YGL260WP53056 76 aa1.32□□□□□ -2.2
TFB5YDR079C-A SPO20Q04359 397 aa1.32□□□□□ -2.2
TFB5YDR079C-A ARG7Q04728 441 aa1.32□□□□□ -2.2
TFB5YDR079C-A ESC2Q06340 456 aa1.32□□□□□ -2.2
TFB5YDR079C-A YPR089WO13585 888 aa1.31□□□□□ -2.2
TFB5YDR079C-A TPK2P06245 380 aa1.31□□□□□ -2.2
TFB5YDR079C-A ECM1P39715 212 aa1.31□□□□□ -2.2
TFB5YDR079C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
TFB5YDR079C-A RGC1Q06108 1083 aaKnown RBP1.31□□□□□ -2.2
TFB5YDR079C-A AAD3P25612 363 aa1.3□□□□□ -2.2
TFB5YDR079C-A MBP1P39678 833 aa1.3□□□□□ -2.2
TFB5YDR079C-A MSC6Q08818 692 aaKnown RBP1.3□□□□□ -2.2
TFB5YDR079C-A BMS1Q08965 1183 aaKnown RBP1.3□□□□□ -2.2
TFB5YDR079C-A HER1Q12276 1246 aa1.3□□□□□ -2.2
TFB5YDR079C-A PPH3P32345 308 aa1.29□□□□□ -2.2
TFB5YDR079C-A ATO2P32907 282 aa1.29□□□□□ -2.2
TFB5YDR079C-A YEL1P34225 687 aa1.29□□□□□ -2.2
TFB5YDR079C-A FLO5P38894 1075 aa1.29□□□□□ -2.2
TFB5YDR079C-A CTK1Q03957 528 aaKnown RBP1.29□□□□□ -2.2
TFB5YDR079C-A CLF1Q12309 687 aaPredicted RBP1.29□□□□□ -2.2
TFB5YDR079C-A ZRT2Q12436 422 aa1.29□□□□□ -2.2
TFB5YDR079C-A MGM1P32266 881 aa1.28□□□□□ -2.2
TFB5YDR079C-A ERT1P38140 529 aa1.28□□□□□ -2.2
TFB5YDR079C-A KSP1P38691 1029 aaKnown RBP1.28□□□□□ -2.2
TFB5YDR079C-A YGR151CP53287 111 aa1.28□□□□□ -2.2
TFB5YDR079C-A ADE8P04161 214 aa1.27□□□□□ -2.21
TFB5YDR079C-A YAP1P19880 650 aaKnown RBP1.27□□□□□ -2.21
TFB5YDR079C-A MCM2P29469 868 aa1.27□□□□□ -2.21
TFB5YDR079C-A SKP2P42843 763 aa1.27□□□□□ -2.21
TFB5YDR079C-A CCM1P48237 864 aaPredicted RBP1.27□□□□□ -2.21
TFB5YDR079C-A APJ1P53940 528 aa1.27□□□□□ -2.21
TFB5YDR079C-A VPS16Q03308 798 aa1.27□□□□□ -2.21
TFB5YDR079C-A SNA4Q07549 140 aa1.27□□□□□ -2.21
TFB5YDR079C-A BSC6Q08280 497 aa1.27□□□□□ -2.21
TFB5YDR079C-A YOR022CQ12204 715 aa1.27□□□□□ -2.21
TFB5YDR079C-A CRC1Q12289 327 aa1.27□□□□□ -2.21
TFB5YDR079C-A MDM20Q12387 796 aaKnown RBP1.27□□□□□ -2.21
TFB5YDR079C-A RTT107P38850 1070 aa1.26□□□□□ -2.21
TFB5YDR079C-A AZF1P41696 914 aa1.26□□□□□ -2.21
TFB5YDR079C-A BUL2Q03758 920 aaKnown RBP1.26□□□□□ -2.21
TFB5YDR079C-A MRPL1Q04599 285 aa1.26□□□□□ -2.21
TFB5YDR079C-A ESF1Q06344 628 aaKnown RBP1.26□□□□□ -2.21
TFB5YDR079C-A RSC3Q06639 885 aa1.26□□□□□ -2.21
TFB5YDR079C-A YDR306CQ06640 478 aa1.26□□□□□ -2.21
TFB5YDR079C-A GRS2Q06817 618 aa1.26□□□□□ -2.21
TFB5YDR079C-A NRT1Q08485 598 aa1.26□□□□□ -2.21
TFB5YDR079C-A LAM4P38800 1345 aa1.25□□□□□ -2.21
TFB5YDR079C-A CDC34P14682 295 aa1.25□□□□□ -2.21
TFB5YDR079C-A CYS3P31373 394 aaKnown RBP1.25□□□□□ -2.21
TFB5YDR079C-A ABD1P32783 436 aaPredicted RBP1.25□□□□□ -2.21
TFB5YDR079C-A YRO2P38079 344 aa1.25□□□□□ -2.21
TFB5YDR079C-A YMR124WP39523 943 aaKnown RBP1.25□□□□□ -2.21
TFB5YDR079C-A MET10P39692 1035 aa1.25□□□□□ -2.21
TFB5YDR079C-A SIT1P39980 628 aa1.25□□□□□ -2.21
TFB5YDR079C-A SPR28Q04921 423 aa1.25□□□□□ -2.21
TFB5YDR079C-A YMR230W-AQ3E7B5 62 aa1.25□□□□□ -2.21
TFB5YDR079C-A LEU2P04173 364 aaPredicted RBP1.24□□□□□ -2.21
TFB5YDR079C-A YER190C-BP0CX94 160 aa1.24□□□□□ -2.21
TFB5YDR079C-A YEL077W-AP0CX95 160 aa1.24□□□□□ -2.21
TFB5YDR079C-A YGR296C-BP0CX96 160 aa1.24□□□□□ -2.21
TFB5YDR079C-A YPL283W-BP0CX97 160 aa1.24□□□□□ -2.21
TFB5YDR079C-A YPR204C-AP0CX98 160 aa1.24□□□□□ -2.21
TFB5YDR079C-A FMP46P36141 133 aaKnown RBP1.24□□□□□ -2.21
TFB5YDR079C-A UBP7P40453 1071 aa1.24□□□□□ -2.21
TFB5YDR079C-A IRR1P40541 1150 aa1.24□□□□□ -2.21
TFB5YDR079C-A PMT6P42934 759 aa1.24□□□□□ -2.21
TFB5YDR079C-A VPS36Q06696 566 aa1.24□□□□□ -2.21
TFB5YDR079C-A YPT1P01123 206 aaKnown RBP1.23□□□□□ -2.21
TFB5YDR079C-A ABF1P14164 731 aa1.23□□□□□ -2.21
TFB5YDR079C-A YCP4P25349 247 aaKnown RBP1.23□□□□□ -2.21
TFB5YDR079C-A PCA1P38360 1216 aa1.23□□□□□ -2.21
TFB5YDR079C-A STM1P39015 273 aaKnown RBP1.23□□□□□ -2.21
TFB5YDR079C-A LYS20P48570 428 aaKnown RBP1.23□□□□□ -2.21
TFB5YDR079C-A IDP3P53982 420 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms