RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C PPH3P32345 308 aa7.42□□□□□ -1.22
CDC13YDL220C RPT1P33299 467 aaKnown RBP7.42□□□□□ -1.22
CDC13YDL220C SQT1P35184 431 aa7.42□□□□□ -1.22
CDC13YDL220C YKL063CP35725 167 aa7.42□□□□□ -1.22
CDC13YDL220C YKR015CP36111 568 aa7.42□□□□□ -1.22
CDC13YDL220C YER186CP40101 306 aa7.42□□□□□ -1.22
CDC13YDL220C DON1Q05610 365 aa7.42□□□□□ -1.22
CDC13YDL220C SIL1Q08199 421 aa7.42□□□□□ -1.22
CDC13YDL220C TAF10Q12030 206 aa7.42□□□□□ -1.22
CDC13YDL220C APM4Q99186 491 aa7.42□□□□□ -1.22
CDC13YDL220C MTF2P10849 440 aa7.41□□□□□ -1.22
CDC13YDL220C MCM3P24279 971 aaKnown RBP7.41□□□□□ -1.22
CDC13YDL220C TPO5P36029 618 aa7.41□□□□□ -1.22
CDC13YDL220C HXT6P39003 570 aaKnown RBP7.41□□□□□ -1.22
CDC13YDL220C HXT7P39004 570 aa7.41□□□□□ -1.22
CDC13YDL220C ZRG8P40021 1076 aa7.41□□□□□ -1.22
CDC13YDL220C ATH1P48016 1211 aa7.41□□□□□ -1.22
CDC13YDL220C GPI8P49018 411 aa7.41□□□□□ -1.22
CDC13YDL220C ZRG17P53735 605 aa7.41□□□□□ -1.22
CDC13YDL220C NGL3Q03210 505 aa7.41□□□□□ -1.22
CDC13YDL220C HER2Q03557 464 aa7.41□□□□□ -1.22
CDC13YDL220C TAP42Q04372 366 aa7.41□□□□□ -1.22
CDC13YDL220C YDL124WQ07551 312 aaKnown RBP7.41□□□□□ -1.22
CDC13YDL220C YDL109CQ12103 647 aa7.41□□□□□ -1.22
CDC13YDL220C RPS6AP0CX37 236 aaKnown RBP7.41□□□□□ -1.22
CDC13YDL220C RPS6BP0CX38 236 aaPredicted RBP7.41□□□□□ -1.22
CDC13YDL220C SPS22P25380 463 aa7.41□□□□□ -1.22
CDC13YDL220C POL4P25615 582 aa7.41□□□□□ -1.22
CDC13YDL220C CNN1P43618 361 aa7.41□□□□□ -1.22
CDC13YDL220C YJR054WP47114 497 aa7.41□□□□□ -1.22
CDC13YDL220C ALT1P52893 592 aa7.41□□□□□ -1.22
CDC13YDL220C PEX15Q08215 383 aa7.41□□□□□ -1.22
CDC13YDL220C BRX1Q08235 291 aaKnown RBP7.41□□□□□ -1.22
CDC13YDL220C SGT1Q08446 395 aa7.41□□□□□ -1.22
CDC13YDL220C YPL150WQ12152 901 aa7.41□□□□□ -1.22
CDC13YDL220C MNL2Q12205 849 aa7.41□□□□□ -1.22
CDC13YDL220C ARP6Q12509 438 aa7.41□□□□□ -1.22
CDC13YDL220C POM152P39685 1337 aa7.41□□□□□ -1.22
CDC13YDL220C SUP45P12385 437 aaKnown RBP7.4□□□□□ -1.22
CDC13YDL220C SEC63P14906 663 aa7.4□□□□□ -1.22
CDC13YDL220C ALG1P16661 449 aa7.4□□□□□ -1.22
CDC13YDL220C DBP3P20447 523 aaKnown RBP7.4□□□□□ -1.22
CDC13YDL220C PWP2P25635 923 aaKnown RBP7.4□□□□□ -1.22
CDC13YDL220C SLA1P32790 1244 aa7.4□□□□□ -1.22
CDC13YDL220C SSO1P32867 290 aa7.4□□□□□ -1.22
CDC13YDL220C AST1P35183 429 aa7.4□□□□□ -1.22
CDC13YDL220C AAP1P37898 856 aaKnown RBP7.4□□□□□ -1.22
CDC13YDL220C TDA10P42938 290 aa7.4□□□□□ -1.22
CDC13YDL220C YJL181WP46987 611 aa7.4□□□□□ -1.22
CDC13YDL220C YOR289WQ12012 251 aaPredicted RBP7.4□□□□□ -1.22
CDC13YDL220C URA1P28272 314 aaPredicted RBP7.4□□□□□ -1.23
CDC13YDL220C VMA8P32610 256 aaKnown RBP7.4□□□□□ -1.23
CDC13YDL220C SAS3P34218 831 aa7.4□□□□□ -1.23
CDC13YDL220C UIP5P36137 443 aa7.4□□□□□ -1.23
CDC13YDL220C KIC1P38692 1080 aa7.4□□□□□ -1.23
CDC13YDL220C QDR2P40474 542 aa7.4□□□□□ -1.23
CDC13YDL220C COG2P53271 262 aa7.4□□□□□ -1.23
CDC13YDL220C SLT2Q00772 484 aa7.4□□□□□ -1.23
CDC13YDL220C LGE1Q02796 332 aaKnown RBP7.4□□□□□ -1.23
CDC13YDL220C FCP1Q03254 732 aa7.4□□□□□ -1.23
CDC13YDL220C RSC3Q06639 885 aa7.4□□□□□ -1.23
CDC13YDL220C AFT2Q08957 416 aa7.4□□□□□ -1.23
CDC13YDL220C SEY1Q99287 776 aa7.4□□□□□ -1.23
CDC13YDL220C KAR1P11927 433 aa7.39□□□□□ -1.23
CDC13YDL220C GFA1P14742 717 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C ISY1P21374 235 aaPredicted RBP7.39□□□□□ -1.23
CDC13YDL220C PKC1P24583 1151 aa7.39□□□□□ -1.23
CDC13YDL220C EUG1P32474 517 aa7.39□□□□□ -1.23
CDC13YDL220C YME1P32795 747 aa7.39□□□□□ -1.23
CDC13YDL220C MRPL17P36528 281 aa7.39□□□□□ -1.23
CDC13YDL220C MBP1P39678 833 aa7.39□□□□□ -1.23
CDC13YDL220C RPN4Q03465 531 aa7.39□□□□□ -1.23
CDC13YDL220C YMR018WQ04364 514 aa7.39□□□□□ -1.23
CDC13YDL220C RIM20Q12033 661 aa7.39□□□□□ -1.23
CDC13YDL220C HSF1P10961 833 aa7.39□□□□□ -1.23
CDC13YDL220C YAK1P14680 807 aa7.39□□□□□ -1.23
CDC13YDL220C STI1P15705 589 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
CDC13YDL220C MEF1P25039 761 aa7.39□□□□□ -1.23
CDC13YDL220C EFT1P32324 842 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C IRC6P43615 237 aa7.39□□□□□ -1.23
CDC13YDL220C POL31P46957 487 aa7.39□□□□□ -1.23
CDC13YDL220C MAL11P53048 616 aa7.39□□□□□ -1.23
CDC13YDL220C YGR016WP53209 190 aa7.39□□□□□ -1.23
CDC13YDL220C YGR054WP53235 642 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C UTP8P53276 713 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C ERG5P54781 538 aa7.39□□□□□ -1.23
CDC13YDL220C BUD22Q04347 519 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C RGC1Q06108 1083 aaKnown RBP7.39□□□□□ -1.23
CDC13YDL220C DNF3Q12674 1656 aa7.39□□□□□ -1.23
CDC13YDL220C RED1P14291 827 aa7.38□□□□□ -1.23
CDC13YDL220C MER1P16523 270 aa7.38□□□□□ -1.23
CDC13YDL220C APN1P22936 367 aa7.38□□□□□ -1.23
CDC13YDL220C NIP1P32497 812 aaKnown RBP7.38□□□□□ -1.23
CDC13YDL220C YKR078WP36158 585 aaKnown RBP7.38□□□□□ -1.23
CDC13YDL220C GRE3P38715 327 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
CDC13YDL220C YER137CP40083 148 aaKnown RBP7.38□□□□□ -1.23
CDC13YDL220C MNT3P40549 630 aa7.38□□□□□ -1.23
CDC13YDL220C IMD3P50095 523 aaKnown RBP7.38□□□□□ -1.23
CDC13YDL220C EFM5P53200 248 aaKnown RBP7.38□□□□□ -1.23
CDC13YDL220C TBF1Q02457 562 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms