RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCM1	YCR065W	XYL2	Q07993	356 aa		4.55	□□□□□ -1.68
HCM1	YCR065W	TMA17	Q12513	150 aa		4.55	□□□□□ -1.68
HCM1	YCR065W	DFG16	Q99234	619 aa		4.55	□□□□□ -1.68
HCM1	YCR065W	PHO84	P25297	587 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	CDC12	P32468	407 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	MRS6	P32864	603 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	EXO84	P38261	753 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	HSM3	P38348	480 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SEC26	P41810	973 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	LAM5	P43560	674 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HCM1	YCR065W	ALF1	P53904	254 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	TGL2	P54857	326 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	CSR1	Q06705	408 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	HMI1	Q12039	706 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	MED1	Q12321	566 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SWR1	Q05471	1514 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	IMP2'	P32351	346 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	PXA2	P34230	853 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HCM1	YCR065W	CCL1	P37366	393 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	ERT1	P38140	529 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	PEX18	P38855	283 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	FMP10	P40098	244 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	UTP18	P40362	594 aa	Predicted RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	NIT1	P40447	199 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	ALR2	P43553	858 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SAE2	P46946	345 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	YJR120W	P47157	116 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	HFM1	P51979	1187 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SPC105	P53148	917 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	COG6	P53959	839 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	SNZ1	Q03148	297 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	BUL2	Q03758	920 aa	Known RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	YMR111C	Q04461	462 aa	Predicted RBP	4.54	□□□□□ -1.68
HCM1	YCR065W	ATG13	Q06628	738 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	YOR389W	Q08912	624 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HCM1	YCR065W	YLR125W	Q12138	136 aa		4.54	□□□□□ -1.68
HCM1	YCR065W	RPB2	P08518	1224 aa	Known RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	SUI2	P20459	304 aa	Known RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	ACP1	P32463	125 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	EFB1	P32471	206 aa	Known RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	TIM23	P32897	222 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	AFR1	P33304	620 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	SEG2	P34250	1132 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	YBL028C	P38202	106 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	RFC5	P38251	354 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	SAH1	P39954	449 aa	Known RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	CHZ1	P40019	153 aa	Predicted RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	YIL166C	P40445	542 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	MNT3	P40549	630 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	SGM1	P47166	707 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	YGR125W	P53273	1036 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	PTA1	Q01329	785 aa	Predicted RBP	4.53	□□□□□ -1.68
HCM1	YCR065W	EAF1	Q06337	982 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	REH1	Q06709	432 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	SPO75	Q07798	868 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	PSR2	Q07949	397 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	ESC8	Q08119	714 aa		4.53	□□□□□ -1.68
HCM1	YCR065W	GAL1	P04385	528 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	PRP9	P19736	530 aa	Known RBP	4.52	□□□□□ -1.69
HCM1	YCR065W	NPP1	P25353	742 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	PTH2	P34222	208 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	TRZ1	P36159	838 aa	Predicted RBP	4.52	□□□□□ -1.69
HCM1	YCR065W	GIC1	P38785	314 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	UTP8	P53276	713 aa	Known RBP	4.52	□□□□□ -1.69
HCM1	YCR065W	YNL050C	P53952	270 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	FLC1	Q08967	793 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	LSP1	Q12230	341 aa	Known RBP	4.52	□□□□□ -1.69
HCM1	YCR065W	ADR1	P07248	1323 aa		4.52	□□□□□ -1.69
HCM1	YCR065W	CYC1	P00044	109 aa	Predicted RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	RPC40	P07703	335 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	SST2	P11972	698 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	HMG1	P12683	1054 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	PMS1	P14242	873 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	REC107	P21651	314 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	MCM3	P24279	971 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	ARE1	P25628	610 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	THI4	P32318	326 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	SCT1	P32784	759 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	COY1	P34237	679 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	YBR284W	P38150	797 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	RAD26	P40352	1085 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	HUL4	P40985	892 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	FOL2	P51601	243 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	ERP6	P53198	216 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	SDA1	P53313	767 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	SPO1	P53541	631 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	NCS2	P53923	493 aa	Predicted RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	YML131W	Q03102	365 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	NSE5	Q03718	556 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	SGD1	Q06132	899 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	OSH2	Q12451	1283 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	BRR1	Q99177	341 aa	Predicted RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	YMR084W	A2P2R3	262 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	RPL8A	P17076	256 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	HSP60	P19882	572 aa	Known RBP	4.51	□□□□□ -1.69
HCM1	YCR065W	APL1	P27351	700 aa		4.51	□□□□□ -1.69
HCM1	YCR065W	AAR2	P32357	355 aa	Predicted RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms