RNA–Protein interactions for RNA: YBR038W

CHS2, Transcript of Chitin synthase II, yeast

Gene CHS2, Length 2,892 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS2	YBR038W	NMD5	P46970	1048 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	YJL007C	P47080	104 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	ORC4	P54791	529 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	LCB5	Q06147	687 aa	Known RBP	3.29	□□□□□ -1.88
CHS2	YBR038W	GNT1	Q12096	491 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	YDL206W	Q12424	762 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	RKM4	Q12504	494 aa		3.29	□□□□□ -1.88
CHS2	YBR038W	PMS1	P14242	873 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	HEM15	P16622	393 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	BUD14	P27637	709 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	TFC3	P34111	1160 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	YKL050C	P35736	922 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	ECM2	P38241	364 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	HSM3	P38348	480 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	SUL1	P38359	859 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	REV7	P38927	245 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	LCB2	P40970	561 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	BRE2	P43132	505 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	ZPR1	P53303	486 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	SLT2	Q00772	484 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	UTP14	Q04500	899 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	PHM6	Q05637	104 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	YPL216W	Q08964	1102 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	GCR1	P07261	785 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	SPO16	P17122	198 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	EST1	P17214	699 aa	Predicted RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	IME1	P21190	360 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	RET1	P22276	1149 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	NUD1	P32336	851 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	MVD1	P32377	396 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	YSC83	P32792	385 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.28	□□□□□ -1.88	not detected
CHS2	YBR038W	YBL055C	P34220	418 aa	Predicted RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	MCD4	P36051	919 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	UBP13	P38187	747 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	FZO1	P38297	855 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	RRT2	P38332	387 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	HIS2	P38635	335 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	PIH1	P38768	344 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	TIF4631	P39935	952 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	TAF6	P53040	516 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	CPR6	P53691	371 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	FPK1	P53739	893 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	PGA2	P53903	129 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	YNL058C	P53947	316 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	ALD6	P54115	500 aa	Known RBP	3.28	□□□□□ -1.88
CHS2	YBR038W	AIM33	Q04516	312 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	YLH47	Q06493	454 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	GUD1	Q07729	489 aa		3.28	□□□□□ -1.88
CHS2	YBR038W	ILV1	P00927	576 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	CLB4	P24871	460 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	SUV3	P32580	737 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YKU70	P32807	602 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	SPT23	P35210	1082 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YBR062C	P38239	180 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YGR111W	P53265	400 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YNL040W	P53960	456 aa	Predicted RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	TIM8	P57744	87 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YPL109C	Q02981	657 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	PNP1	Q05788	311 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	TYW1	Q08960	810 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	CDC53	Q12018	815 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	RRG1	Q12167	365 aa	Predicted RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	PGK1	P00560	416 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	TAL1	P15019	335 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	POL3	P15436	1097 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	MRPL25	P23369	157 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	DBF4	P32325	704 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	GCD6	P32501	712 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	MRE11	P32829	692 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	STE13	P33894	931 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	VPS35	P34110	944 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	SPC97	P38863	823 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	FIS1	P40515	155 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	TAN1	P53072	289 aa	Predicted RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	ARI1	P53111	347 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	GTB1	Q04924	702 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YDR222W	Q04925	415 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	YDL124W	Q07551	312 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	WHI4	Q07655	649 aa	Known RBP	3.27	□□□□□ -1.89
CHS2	YBR038W	YIG1	Q08956	461 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	TAF3	Q12297	353 aa		3.27	□□□□□ -1.89
CHS2	YBR038W	MOD5	P07884	428 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	TUB3	P09734	445 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	PRP4	P20053	465 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	BAS1	P22035	811 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	SIN4	P32259	974 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	AFG2	P32794	780 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	YKL023W	P36103	277 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	PGM2	P37012	569 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	VHC1	P38329	1120 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	RPL34B	P40525	121 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	AIM21	P40563	679 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	RLP7	P40693	322 aa	Known RBP	3.26	□□□□□ -1.89
CHS2	YBR038W	SAE2	P46946	345 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	BRO1	P48582	844 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	VPS4	P52917	437 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	PUS2	P53167	370 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	NNF2	P53253	936 aa		3.26	□□□□□ -1.89
CHS2	YBR038W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.26	□□□□□ -1.89	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms