RNA–Protein interactions for RNA: ENST00000507993.5

TTC39B-207, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-207ENST00000507993 NBPF6Q5VWK0 638 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 NBPF5PQ86XG9 351 aaPredicted RBP7.86□□□□□ -1.15
TTC39B-207ENST00000507993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.86□□□□□ -1.15
TTC39B-207ENST00000507993 NBPF4Q96M43 638 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 EGFL7Q9UHF1 273 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 PRR12Q9ULL5 1215 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 TMEM131LA2VDJ0 1609 aa7.86□□□□□ -1.15
TTC39B-207ENST00000507993 GOLGA6L22H0YM25 854 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 HOXA2O43364 376 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 SH3BP5O60239 455 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 SSR1P43307 286 aaKnown RBP7.85□□□□□ -1.15
TTC39B-207ENST00000507993 MAP2K1Q02750 393 aaPredicted RBP7.85□□□□□ -1.15
TTC39B-207ENST00000507993 COL19A1Q14993 1142 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 LARP1Q6PKG0 1096 aaKnown RBP7.85□□□□□ -1.15
TTC39B-207ENST00000507993 STAG1Q8WVM7 1258 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 DDX17Q92841 729 aaKnown RBP7.85□□□□□ -1.15
TTC39B-207ENST00000507993 RNF34Q969K3 372 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 GMLQ99445 158 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 TSPYL1Q9H0U9 437 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 ADAMTS13Q76LX8 1427 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 MSH6P52701 1360 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 PLEKHG1Q9ULL1 1385 aa7.85□□□□□ -1.15
TTC39B-207ENST00000507993 NWD1Q149M9 1564 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 PTPRUQ92729 1446 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 GOLIM4O00461 696 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 KIAA2012Q0VF49 1180 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 PNMA2Q9UL42 364 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 CHD2O14647 1828 aaKnown RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 LRP6O75581 1613 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 PHLPP1O60346 1717 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 ERBB3P21860 1342 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 KDM5AP29375 1690 aaKnown RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 CCDC66A2RUB6 948 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 TULP2O00295 520 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 PRMT3O60678 531 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 SATB1Q01826 763 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 MTMR3Q13615 1198 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 GNL2Q13823 731 aaKnown RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 ZKSCAN8Q15776 578 aaPredicted RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 FMNL3Q8IVF7 1028 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 NGEFQ8N5V2 710 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 ANKRD7Q92527 254 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 TSPAN18Q96SJ8 248 aa7.84□□□□□ -1.15
TTC39B-207ENST00000507993 CGNQ9P2M7 1197 aaKnown RBP7.84□□□□□ -1.15
TTC39B-207ENST00000507993 SRCAPQ6ZRS2 3230 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 NUDT7P0C024 238 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 ARHGAP4P98171 946 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 ZFYVE27Q5T4F4 411 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 CREBRFQ8IUR6 639 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 ANKMY2Q8IV38 441 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 SDR16C5Q8N3Y7 309 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 KIF3AQ9Y496 699 aa7.83□□□□□ -1.16
TTC39B-207ENST00000507993 SLC34A2O95436 690 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 S100BP04271 92 aaPredicted RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 FOXD4Q12950 439 aaPredicted RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 LONRF3Q496Y0 759 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 FAM174AQ8TBP5 190 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 DDX56Q9NY93 547 aaKnown RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 NUP155O75694 1391 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 HMGB1P1B2RPK0 211 aaPredicted RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 C21orf2O43822 256 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 TBX4P57082 545 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 DPYDQ12882 1025 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 HDAC1Q13547 482 aaPredicted RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 NR6A1Q15406 480 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 PLEKHM2Q8IWE5 1019 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 PDCL2Q8N4E4 241 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 RBSNQ9H1K0 784 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 RBM28Q9NW13 759 aaKnown RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 PCDHGA4Q9Y5G9 962 aa7.82□□□□□ -1.16
TTC39B-207ENST00000507993 COL16A1Q07092 1604 aaPredicted RBP7.82□□□□□ -1.16
TTC39B-207ENST00000507993 JCADQ9P266 1359 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 CALRP27797 417 aaKnown RBP7.81□□□□□ -1.16
TTC39B-207ENST00000507993 APLP1P51693 650 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 SYCP1Q15431 976 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 ZSCAN23Q3MJ62 389 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 PIBF1Q8WXW3 757 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 SPTLC3Q9NUV7 552 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.81□□□□□ -1.16
TTC39B-207ENST00000507993 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.81□□□□□ -1.16
TTC39B-207ENST00000507993 TRPM1Q7Z4N2 1603 aa7.81□□□□□ -1.16
TTC39B-207ENST00000507993 RHBDL3P58872 404 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 ARID5AQ03989 594 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 MTA1Q13330 715 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 SWI5Q1ZZU3 235 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 ZNF771Q7L3S4 317 aaPredicted RBP7.8□□□□□ -1.16
TTC39B-207ENST00000507993 CCAR1Q8IX12 1150 aaKnown RBP7.8□□□□□ -1.16
TTC39B-207ENST00000507993 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 HELBQ8NG08 1087 aaPredicted RBP7.8□□□□□ -1.16
TTC39B-207ENST00000507993 TIGD1Q96MW7 591 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 PARP2Q9UGN5 583 aa7.8□□□□□ -1.16
TTC39B-207ENST00000507993 PDZRN3Q9UPQ7 1066 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms