RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MCMDC2Q4G0Z9 681 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 ZSCAN16Q9H4T2 348 aaPredicted RBP12.53□□□□□ -0.4
VAPB-204ENST00000475243 VEZTQ9HBM0 779 aa12.53□□□□□ -0.4
VAPB-204ENST00000475243 NUCB1Q02818 461 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 AKR1B10O60218 316 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.4
VAPB-204ENST00000475243 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 OGFOD1Q8N543 542 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 ESR2Q92731 530 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 NLRP3Q96P20 1036 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.4
VAPB-204ENST00000475243 GIMAP7Q8NHV1 300 aa12.52□□□□□ -0.4
VAPB-204ENST00000475243 NAPAP54920 295 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 GJC1P36383 396 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 NFATC2IPQ8NCF5 419 aa12.52□□□□□ -0.41
VAPB-204ENST00000475243 KIAA0753Q2KHM9 967 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 PPP1R14CQ8TAE6 165 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
VAPB-204ENST00000475243 MRVI1Q9Y6F6 885 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
VAPB-204ENST00000475243 ATP2C2O75185 946 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 ARL1P40616 181 aaPredicted RBP12.51□□□□□ -0.41
VAPB-204ENST00000475243 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 ACTN2P35609 894 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 MAGEB6Q8N7X4 407 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 RXRAP19793 462 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 DHX58Q96C10 678 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 PYM1Q9BRP8 204 aaKnown RBP12.51□□□□□ -0.41
VAPB-204ENST00000475243 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
VAPB-204ENST00000475243 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
VAPB-204ENST00000475243 ERMNQ8TAM6 284 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 MPHOSPH6Q99547 160 aaKnown RBP12.5□□□□□ -0.41
VAPB-204ENST00000475243 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 NEMFO60524 1076 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 TBC1D32Q96NH3 1257 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 PLIN2Q99541 437 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
VAPB-204ENST00000475243 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
VAPB-204ENST00000475243 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 PDE1AP54750 535 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 ASIC1P78348 528 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 SP4Q02446 784 aa12.5□□□□□ -0.41
VAPB-204ENST00000475243 CUL7Q14999 1698 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
VAPB-204ENST00000475243 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 MCM7P33993 719 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 HSF2BPO75031 334 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
VAPB-204ENST00000475243 CNNM2Q9H8M5 875 aa12.49□□□□□ -0.41
VAPB-204ENST00000475243 KRT13P13646 458 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 ZKSCAN3Q9BRR0 538 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 HDAC9Q9UKV0 1011 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 IFI16Q16666 785 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 MCM9Q9NXL9 1143 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 MICALCLQ6ZW33 695 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 DZIP3Q86Y13 1208 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 MSH6P52701 1360 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 MRPS9P82933 396 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 OTUD6BQ8N6M0 293 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 KCNG4Q8TDN1 519 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 FANCAO15360 1455 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
VAPB-204ENST00000475243 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 DACT1Q9NYF0 836 aa12.48□□□□□ -0.41
VAPB-204ENST00000475243 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
VAPB-204ENST00000475243 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
VAPB-204ENST00000475243 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
VAPB-204ENST00000475243 STX17P56962 302 aa12.47□□□□□ -0.41
VAPB-204ENST00000475243 EEF2P13639 858 aaKnown RBP12.47□□□□□ -0.41
VAPB-204ENST00000475243 MCM6Q14566 821 aa12.47□□□□□ -0.41
VAPB-204ENST00000475243 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
VAPB-204ENST00000475243 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms