RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 TSHZ1Q6ZSZ6 1077 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 RASGRP4Q8TDF6 673 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 SCG3Q8WXD2 468 aaKnown RBP5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 SEC16BQ96JE7 1060 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 MPHOSPH9Q99550 1183 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 STIM2Q9P246 746 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 NEXMIFQ5QGS0 1516 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 NWD1Q149M9 1564 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 ATAD2Q6PL18 1390 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 NCOA3Q9Y6Q9 1424 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 SCAF11Q99590 1463 aaKnown RBP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 HMGB1P1B2RPK0 211 aaPredicted RBP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 TNFRSF10BO14763 440 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 CEBPAP49715 358 aaPredicted RBP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 CBLBQ13191 982 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 KMT5BQ4FZB7 885 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 IFFO2Q5TF58 517 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 BRICD5Q6PL45 260 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 CCDC136Q96JN2 1154 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 RPS6KC1Q96S38 1066 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 CSRNP1Q96S65 589 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 IER2Q9BTL4 223 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 C12orf49Q9H741 205 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 ZNF408Q9H9D4 720 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 ZNF358Q9NW07 568 aa5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 V9GY48 417 aaPredicted RBP5.4□□□□□ -1.54
UBE2D4-210ENST00000473007 NRXN3Q9Y4C0 1643 aa5.4□□□□□ -1.55
UBE2D4-210ENST00000473007 PSDA5PKW4 1024 aaPredicted RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 FAM221BA6H8Z2 402 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 MAFGO15525 162 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 KLF4O43474 513 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 CDC45O75419 566 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 SSBP05455 408 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 NFX1Q12986 1120 aaKnown RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 RASA3Q14644 834 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 COX20Q5RI15 118 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 ODR4Q5SWX8 454 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 POTEAQ6S8J7 498 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 ANKS3Q6ZW76 656 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 PPARGC1BQ86YN6 1023 aaKnown RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 GJD3Q8N144 294 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 C8orf48Q96LL4 319 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 EVA1BQ9NVM1 165 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 FANCLQ9NW38 375 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 SNTG2Q9NY99 539 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 TTF2Q9UNY4 1162 aaKnown RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 SALL2Q9Y467 1007 aaPredicted RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 ZNF335Q9H4Z2 1342 aaPredicted RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 PLEKHG1Q9ULL1 1385 aa5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 NKTRP30414 1462 aaKnown RBP5.39□□□□□ -1.55
UBE2D4-210ENST00000473007 CPS1P31327 1500 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 XRN1Q8IZH2 1706 aaKnown RBP5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 ZBTB39O15060 712 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 TOM1O60784 492 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 CCNYL3P0C7X3 344 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 GYS2P54840 703 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 IDI1Q13907 227 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 GPR153Q6NV75 609 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 SH3BP5LQ7L8J4 393 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 LRP10Q7Z4F1 713 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 SH3TC2Q8TF17 1288 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 SLC39A7Q92504 469 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 SGSM3Q96HU1 749 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 DEPDC7Q96QD5 511 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 KANSL2Q9H9L4 492 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 POLIQ9UNA4 740 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 SPG7Q9UQ90 795 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 PCDHB11Q9Y5F2 797 aa5.38□□□□□ -1.55
UBE2D4-210ENST00000473007 TMEM229AB2RXF0 380 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ACTN4O43707 911 aaKnown RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 SH3BP5O60239 455 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 PAX3P23760 479 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ETFBP38117 255 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 MASP1P48740 699 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 APLP1P51693 650 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 RAB33AQ14088 237 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 TAF1CQ15572 869 aaPredicted RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 NBPF20Q3BBV1 942 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 FOXD4L6Q3SYB3 417 aaPredicted RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 C4orf46Q504U0 113 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 POTEHQ6S545 545 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 FOXD4L3Q6VB84 417 aaPredicted RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ERMP1Q7Z2K6 904 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 SAMD7Q7Z3H4 446 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 KIAA0907Q7Z7F0 614 aaPredicted RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 FERMT3Q86UX7 667 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ATCAYQ86WG3 371 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ANKLE2Q86XL3 938 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 TNS4Q8IZW8 715 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 NME8Q8N427 588 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 ABTB2Q8N961 1025 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 PRPF38AQ8NAV1 312 aaKnown RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 APPBP2Q92624 585 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 TRIM55Q9BYV6 548 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 MAF1Q9H063 256 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms