RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
CSGALNACT1-202ENST00000397998 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SEC62Q99442 399 aaKnown RBP12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CASQ1P31415 396 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 LMBR1LQ6UX01 489 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SPTLC2O15270 562 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 KIAA1210Q9ULL0 1709 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CHD1O14646 1710 aa12.89□□□□□ -0.35
CSGALNACT1-202ENST00000397998 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SYKP43405 635 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ARID5BQ14865 1188 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 RPAP1Q9BWH6 1393 aaPredicted RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 FILIP1LQ4L180 1135 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZNF213O14771 459 aa12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TDRD7Q8NHU6 1098 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
CSGALNACT1-202ENST00000397998 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 GABPB1Q06547 395 aaPredicted RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ERCC6LQ2NKX8 1250 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 MICU3Q86XE3 530 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 UTP14AQ9BVJ6 771 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TNRQ92752 1358 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CDKL5O76039 1030 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TIMM10P62072 90 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
CSGALNACT1-202ENST00000397998 POLA2Q14181 598 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZNF710Q8N1W2 664 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZBTB3Q9H5J0 574 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ELP1O95163 1332 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 PAG1Q9NWQ8 432 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
CSGALNACT1-202ENST00000397998 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SART3Q15020 963 aaKnown RBP12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TNNI3KQ59H18 835 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 FPGT-TNNI3KV9GXZ4 949 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ERLIN1O75477 346 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 HOXB7P09629 217 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 LMAN1P49257 510 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CCDC102BQ68D86 513 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SMARCE1Q969G3 411 aa12.85□□□□□ -0.35
CSGALNACT1-202ENST00000397998 RXRAP19793 462 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ALG1Q9BT22 464 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 PRC1O43663 620 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 TAF5LO75529 589 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CCDC144BQ3MJ40 725 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 NFATC2IPQ8NCF5 419 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 ARFGAP3Q9NP61 516 aa12.84□□□□□ -0.35
CSGALNACT1-202ENST00000397998 JAKMIP3Q5VZ66 844 aa12.83□□□□□ -0.36
CSGALNACT1-202ENST00000397998 NCOA7Q8NI08 942 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms