RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
CSGALNACT1-202ENST00000397998 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CSGALNACT1-202ENST00000397998 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
CSGALNACT1-202ENST00000397998 DCAF8L2P0C7V8 631 aa18.75■□□□□ 0.59
CSGALNACT1-202ENST00000397998 PCGF6Q9BYE7 350 aa18.23■□□□□ 0.51
CSGALNACT1-202ENST00000397998 HRCP23327 699 aa17.96■□□□□ 0.47
CSGALNACT1-202ENST00000397998 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
CSGALNACT1-202ENST00000397998 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
CSGALNACT1-202ENST00000397998 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
CSGALNACT1-202ENST00000397998 FAM9AQ8IZU1 332 aaPredicted RBP17.65■□□□□ 0.42
CSGALNACT1-202ENST00000397998 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
CSGALNACT1-202ENST00000397998 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
CSGALNACT1-202ENST00000397998 ZEB1P37275 1124 aaPredicted RBP17.42■□□□□ 0.38
CSGALNACT1-202ENST00000397998 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
CSGALNACT1-202ENST00000397998 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-202ENST00000397998 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
CSGALNACT1-202ENST00000397998 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
CSGALNACT1-202ENST00000397998 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-202ENST00000397998 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
CSGALNACT1-202ENST00000397998 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
CSGALNACT1-202ENST00000397998 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
CSGALNACT1-202ENST00000397998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.3
CSGALNACT1-202ENST00000397998 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
CSGALNACT1-202ENST00000397998 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
CSGALNACT1-202ENST00000397998 APLP2Q06481 763 aa16.81■□□□□ 0.28
CSGALNACT1-202ENST00000397998 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
CSGALNACT1-202ENST00000397998 RANGAP1P46060 587 aaPredicted RBP16.78■□□□□ 0.28
CSGALNACT1-202ENST00000397998 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-202ENST00000397998 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
CSGALNACT1-202ENST00000397998 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
CSGALNACT1-202ENST00000397998 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
CSGALNACT1-202ENST00000397998 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
CSGALNACT1-202ENST00000397998 MYT1Q01538 1121 aa16.6■□□□□ 0.25
CSGALNACT1-202ENST00000397998 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
CSGALNACT1-202ENST00000397998 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
CSGALNACT1-202ENST00000397998 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
CSGALNACT1-202ENST00000397998 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
CSGALNACT1-202ENST00000397998 ABCC9O60706 1549 aa16.32■□□□□ 0.2
CSGALNACT1-202ENST00000397998 ITGAEP38570 1179 aa16.29■□□□□ 0.2
CSGALNACT1-202ENST00000397998 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
CSGALNACT1-202ENST00000397998 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
CSGALNACT1-202ENST00000397998 MIER1Q8N108 512 aa16.18■□□□□ 0.18
CSGALNACT1-202ENST00000397998 NEFLP07196 543 aa16.16■□□□□ 0.18
CSGALNACT1-202ENST00000397998 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
CSGALNACT1-202ENST00000397998 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
CSGALNACT1-202ENST00000397998 BCANQ96GW7 911 aa16.08■□□□□ 0.16
CSGALNACT1-202ENST00000397998 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
CSGALNACT1-202ENST00000397998 CEP162Q5TB80 1403 aa16.06■□□□□ 0.16
CSGALNACT1-202ENST00000397998 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
CSGALNACT1-202ENST00000397998 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
CSGALNACT1-202ENST00000397998 MROH2BQ7Z745 1585 aa15.91■□□□□ 0.14
CSGALNACT1-202ENST00000397998 SOGA1O94964 1423 aa15.89■□□□□ 0.13
CSGALNACT1-202ENST00000397998 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
CSGALNACT1-202ENST00000397998 CLIP1P30622 1438 aa15.85■□□□□ 0.13
CSGALNACT1-202ENST00000397998 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
CSGALNACT1-202ENST00000397998 GOLGA3Q08378 1498 aa15.81■□□□□ 0.12
CSGALNACT1-202ENST00000397998 FKBP8Q14318 412 aa15.8■□□□□ 0.12
CSGALNACT1-202ENST00000397998 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
CSGALNACT1-202ENST00000397998 EEA1Q15075 1411 aa15.79■□□□□ 0.12
CSGALNACT1-202ENST00000397998 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
CSGALNACT1-202ENST00000397998 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
CSGALNACT1-202ENST00000397998 ANP32CO43423 234 aa15.75■□□□□ 0.11
CSGALNACT1-202ENST00000397998 WIZO95785 1651 aa15.74■□□□□ 0.11
CSGALNACT1-202ENST00000397998 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
CSGALNACT1-202ENST00000397998 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
CSGALNACT1-202ENST00000397998 WRNQ14191 1432 aaPredicted RBP eCLIP15.72■□□□□ 0.11
CSGALNACT1-202ENST00000397998 NACADO15069 1562 aa15.71■□□□□ 0.1
CSGALNACT1-202ENST00000397998 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
CSGALNACT1-202ENST00000397998 BAZ1AQ9NRL2 1556 aaPredicted RBP15.69■□□□□ 0.1
CSGALNACT1-202ENST00000397998 TRIM52Q96A61 297 aa15.69■□□□□ 0.1
CSGALNACT1-202ENST00000397998 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
CSGALNACT1-202ENST00000397998 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
CSGALNACT1-202ENST00000397998 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
CSGALNACT1-202ENST00000397998 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
CSGALNACT1-202ENST00000397998 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
CSGALNACT1-202ENST00000397998 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.09
CSGALNACT1-202ENST00000397998 VPS8Q8N3P4 1428 aa15.57■□□□□ 0.08
CSGALNACT1-202ENST00000397998 KANK4Q5T7N3 995 aaPredicted RBP15.54■□□□□ 0.08
CSGALNACT1-202ENST00000397998 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
CSGALNACT1-202ENST00000397998 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
CSGALNACT1-202ENST00000397998 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
CSGALNACT1-202ENST00000397998 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
CSGALNACT1-202ENST00000397998 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
CSGALNACT1-202ENST00000397998 KCNH8Q96L42 1107 aa15.48■□□□□ 0.07
CSGALNACT1-202ENST00000397998 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
CSGALNACT1-202ENST00000397998 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
CSGALNACT1-202ENST00000397998 DHX57Q6P158 1386 aaKnown RBP15.42■□□□□ 0.06
CSGALNACT1-202ENST00000397998 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
CSGALNACT1-202ENST00000397998 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
CSGALNACT1-202ENST00000397998 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
CSGALNACT1-202ENST00000397998 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
CSGALNACT1-202ENST00000397998 ZNF326Q5BKZ1 582 aaKnown RBP15.36■□□□□ 0.05
CSGALNACT1-202ENST00000397998 RBM19Q9Y4C8 960 aaKnown RBP15.36■□□□□ 0.05
CSGALNACT1-202ENST00000397998 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
CSGALNACT1-202ENST00000397998 SMARCA2P51531 1590 aa15.33■□□□□ 0.04
CSGALNACT1-202ENST00000397998 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
CSGALNACT1-202ENST00000397998 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
CSGALNACT1-202ENST00000397998 RAB3GAP2Q9H2M9 1393 aa15.32■□□□□ 0.04
CSGALNACT1-202ENST00000397998 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
CSGALNACT1-202ENST00000397998 SMARCA4P51532 1647 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms