RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 LRRC37A3O60309 1634 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 GOLGA6L19H0YKK7 550 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 TATP17735 454 aaPredicted RBP13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 PRIMPOLQ96LW4 560 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 FMNL2Q96PY5 1086 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 ME1P48163 572 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
ATP2A1-202ENST00000395503 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 GJB4Q9NTQ9 266 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 BECN2A8MW95 431 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 CCDC144BQ3MJ40 725 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 ISM2Q6H9L7 571 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 CCDC144CPQ8IYA2 1237 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 TRMT1Q9NXH9 659 aaKnown RBP13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 MED23Q9ULK4 1368 aa13.66□□□□□ -0.22
ATP2A1-202ENST00000395503 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 POLR3DP05423 398 aaPredicted RBP13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 ATP5JP18859 108 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 ZNF75DP51815 510 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 DDX19AQ9NUU7 478 aaKnown RBP13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 ZNF609O15014 1411 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 NPHP1O15259 732 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 RGPD2P0DJD1 1756 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 RESTQ13127 1097 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 USP28Q96RU2 1077 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 V9GYY5 206 aaPredicted RBP13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 CABP4P57796 275 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 LRRC24Q50LG9 513 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 HMG20BQ9P0W2 317 aa13.65□□□□□ -0.22
ATP2A1-202ENST00000395503 BIN1O00499 593 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.235e-7■■■□□ 16.5
ATP2A1-202ENST00000395503 KRT32Q14532 448 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 SNRPA1P09661 255 aaKnown RBP13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 TNNT1P13805 278 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 PHKG2P15735 406 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 GORABQ5T7V8 394 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 PUS3Q9BZE2 481 aaKnown RBP13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 GOLPH3LQ9H4A5 285 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 A1BGP04217 495 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
ATP2A1-202ENST00000395503 ERBB3P21860 1342 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 CCDC73Q6ZRK6 1079 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 PAG1Q9NWQ8 432 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 ELP1O95163 1332 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 FSIP1Q8NA03 581 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
ATP2A1-202ENST00000395503 LTN1O94822 1766 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 CYP27B1O15528 508 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 NSUN7Q8NE18 718 aaKnown RBP13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 UTYO14607 1347 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 STK11IPQ8N1F8 1099 aa13.62□□□□□ -0.23
ATP2A1-202ENST00000395503 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 HAUS7Q99871 368 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 SLIT1O75093 1534 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 PI16Q6UXB8 463 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
ATP2A1-202ENST00000395503 E7EWF7 191 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 TPM3P06753 285 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 RXRAP19793 462 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 HSPD1P10809 573 aaKnown RBP13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 PTPN21Q16825 1174 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 NFAT5O94916 1531 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 USPL1Q5W0Q7 1092 aa13.6□□□□□ -0.23
ATP2A1-202ENST00000395503 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 M0R2C6 588 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 ADORA1P30542 326 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 ZRSR1Q15695 479 aaKnown RBP13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 NBPF26B4DH59 902 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 NBPF14Q5TI25 921 aa13.59□□□□□ -0.23
ATP2A1-202ENST00000395503 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms