RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
APP-201ENST00000346798 ARHGAP23Q9P227 1491 aa13.95□□□□□ -0.18
APP-201ENST00000346798 NAA30Q147X3 362 aaPredicted RBP13.95□□□□□ -0.18
APP-201ENST00000346798 MCMDC2Q4G0Z9 681 aa13.95□□□□□ -0.18
APP-201ENST00000346798 PDCL2Q8N4E4 241 aa13.95□□□□□ -0.18
APP-201ENST00000346798 BECN2A8MW95 431 aa13.95□□□□□ -0.18
APP-201ENST00000346798 IGSF3O75054 1194 aa13.95□□□□□ -0.18
APP-201ENST00000346798 KRT32Q14532 448 aa13.95□□□□□ -0.18
APP-201ENST00000346798 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
APP-201ENST00000346798 TPD52L1Q16890 204 aaPredicted RBP13.95□□□□□ -0.18
APP-201ENST00000346798 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
APP-201ENST00000346798 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
APP-201ENST00000346798 SLIT1O75093 1534 aa13.95□□□□□ -0.18
APP-201ENST00000346798 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
APP-201ENST00000346798 TPM3P06753 285 aa13.94□□□□□ -0.18
APP-201ENST00000346798 ATP5JP18859 108 aa13.94□□□□□ -0.18
APP-201ENST00000346798 ME1P48163 572 aa13.94□□□□□ -0.18
APP-201ENST00000346798 RESTQ13127 1097 aa13.94□□□□□ -0.18
APP-201ENST00000346798 CCDC144BQ3MJ40 725 aa13.94□□□□□ -0.18
APP-201ENST00000346798 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
APP-201ENST00000346798 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
APP-201ENST00000346798 CCDC144CPQ8IYA2 1237 aa13.94□□□□□ -0.18
APP-201ENST00000346798 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
APP-201ENST00000346798 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
APP-201ENST00000346798 ZNF609O15014 1411 aa13.94□□□□□ -0.18
APP-201ENST00000346798 TNNT1P13805 278 aa13.94□□□□□ -0.18
APP-201ENST00000346798 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
APP-201ENST00000346798 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
APP-201ENST00000346798 CACTINQ8WUQ7 758 aaKnown RBP13.94□□□□□ -0.18
APP-201ENST00000346798 ZNF594Q96JF6 807 aaPredicted RBP13.94□□□□□ -0.18
APP-201ENST00000346798 SNRKQ9NRH2 765 aa13.94□□□□□ -0.18
APP-201ENST00000346798 HAND2P61296 217 aa13.94□□□□□ -0.18
APP-201ENST00000346798 HSP90AB3PQ58FF7 597 aa13.94□□□□□ -0.18
APP-201ENST00000346798 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
APP-201ENST00000346798 KDM3BQ7LBC6 1761 aa13.93□□□□□ -0.18
APP-201ENST00000346798 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
APP-201ENST00000346798 TTLL5Q6EMB2 1281 aa13.93□□□□□ -0.18
APP-201ENST00000346798 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
APP-201ENST00000346798 TRMT1Q9NXH9 659 aaKnown RBP13.93□□□□□ -0.18
APP-201ENST00000346798 USP28Q96RU2 1077 aa13.93□□□□□ -0.18
APP-201ENST00000346798 CFAP45Q9UL16 551 aa13.93□□□□□ -0.18
APP-201ENST00000346798 NFAT5O94916 1531 aa13.93□□□□□ -0.18
APP-201ENST00000346798 UTYO14607 1347 aa13.92□□□□□ -0.18
APP-201ENST00000346798 CCDC73Q6ZRK6 1079 aa13.92□□□□□ -0.18
APP-201ENST00000346798 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
APP-201ENST00000346798 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
APP-201ENST00000346798 TATP17735 454 aaPredicted RBP13.92□□□□□ -0.18
APP-201ENST00000346798 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.92□□□□□ -0.18
APP-201ENST00000346798 V9GYY5 206 aaPredicted RBP13.92□□□□□ -0.18
APP-201ENST00000346798 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
APP-201ENST00000346798 FKBP4Q02790 459 aaKnown RBP eCLIP13.92□□□□□ -0.18
APP-201ENST00000346798 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
APP-201ENST00000346798 KINO60870 393 aaKnown RBP13.91□□□□□ -0.18
APP-201ENST00000346798 RFX5P48382 616 aaPredicted RBP13.91□□□□□ -0.18
APP-201ENST00000346798 POLR3DP05423 398 aaPredicted RBP13.91□□□□□ -0.18
APP-201ENST00000346798 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
APP-201ENST00000346798 FSIP1Q8NA03 581 aa13.91□□□□□ -0.18
APP-201ENST00000346798 ZBTB3Q9H5J0 574 aa13.91□□□□□ -0.18
APP-201ENST00000346798 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
APP-201ENST00000346798 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
APP-201ENST00000346798 NSUN7Q8NE18 718 aaKnown RBP13.91□□□□□ -0.18
APP-201ENST00000346798 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
APP-201ENST00000346798 ERBB3P21860 1342 aa13.9□□□□□ -0.18
APP-201ENST00000346798 NPHP1O15259 732 aa13.9□□□□□ -0.18
APP-201ENST00000346798 PHKG2P15735 406 aa13.9□□□□□ -0.18
APP-201ENST00000346798 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
APP-201ENST00000346798 TDRD7Q8NHU6 1098 aaKnown RBP13.9□□□□□ -0.18
APP-201ENST00000346798 HAUS7Q99871 368 aa13.9□□□□□ -0.18
APP-201ENST00000346798 GJB4Q9NTQ9 266 aa13.9□□□□□ -0.18
APP-201ENST00000346798 PAG1Q9NWQ8 432 aa13.9□□□□□ -0.18
APP-201ENST00000346798 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
APP-201ENST00000346798 USP27XA6NNY8 438 aa13.9□□□□□ -0.18
APP-201ENST00000346798 BIN1O00499 593 aa13.9□□□□□ -0.18
APP-201ENST00000346798 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
APP-201ENST00000346798 LRRC24Q50LG9 513 aa13.9□□□□□ -0.18
APP-201ENST00000346798 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
APP-201ENST00000346798 PLA2G4DQ86XP0 818 aa13.9□□□□□ -0.18
APP-201ENST00000346798 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
APP-201ENST00000346798 A0A1B0GVL5 298 aa13.89□□□□□ -0.19
APP-201ENST00000346798 CTDNEP1O95476 244 aa13.89□□□□□ -0.19
APP-201ENST00000346798 CABP4P57796 275 aa13.89□□□□□ -0.19
APP-201ENST00000346798 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
APP-201ENST00000346798 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
APP-201ENST00000346798 ISM2Q6H9L7 571 aa13.89□□□□□ -0.19
APP-201ENST00000346798 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
APP-201ENST00000346798 TSGA10IPQ3SY00 556 aa13.89□□□□□ -0.19
APP-201ENST00000346798 ZSCAN16Q9H4T2 348 aaPredicted RBP13.89□□□□□ -0.19
APP-201ENST00000346798 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
APP-201ENST00000346798 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
APP-201ENST00000346798 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
APP-201ENST00000346798 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
APP-201ENST00000346798 PDIA4P13667 645 aaKnown RBP13.88□□□□□ -0.19
APP-201ENST00000346798 E7EWF7 191 aa13.88□□□□□ -0.19
APP-201ENST00000346798 IFIT1P09914 478 aaKnown RBP13.88□□□□□ -0.19
APP-201ENST00000346798 ZRSR1Q15695 479 aaKnown RBP13.88□□□□□ -0.19
APP-201ENST00000346798 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
APP-201ENST00000346798 CCDC112Q8NEF3 446 aa13.88□□□□□ -0.19
APP-201ENST00000346798 PFKFB2O60825 505 aa13.88□□□□□ -0.19
APP-201ENST00000346798 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
APP-201ENST00000346798 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms