RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 ESR2Q92731 530 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 ZSCAN22P10073 491 aaPredicted RBP13.01□□□□□ -0.33
TNC-201ENST00000341037 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
TNC-201ENST00000341037 MCMDC2Q4G0Z9 681 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 TMX3Q96JJ7 454 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 ZNF165P49910 485 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
TNC-201ENST00000341037 NMIQ13287 307 aaPredicted RBP13□□□□□ -0.33
TNC-201ENST00000341037 SLC9C2Q5TAH2 1124 aa13□□□□□ -0.33
TNC-201ENST00000341037 CEP135Q66GS9 1140 aa13□□□□□ -0.33
TNC-201ENST00000341037 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
TNC-201ENST00000341037 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
TNC-201ENST00000341037 NLRP3Q96P20 1036 aa13□□□□□ -0.33
TNC-201ENST00000341037 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
TNC-201ENST00000341037 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
TNC-201ENST00000341037 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
TNC-201ENST00000341037 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
TNC-201ENST00000341037 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
TNC-201ENST00000341037 FSD2A1L4K1 749 aa13□□□□□ -0.33
TNC-201ENST00000341037 UBASH3AP57075 661 aa13□□□□□ -0.33
TNC-201ENST00000341037 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
TNC-201ENST00000341037 ANO6Q4KMQ2 910 aa13□□□□□ -0.33
TNC-201ENST00000341037 AKNAD1Q5T1N1 836 aa13□□□□□ -0.33
TNC-201ENST00000341037 CNNM2Q9H8M5 875 aa13□□□□□ -0.33
TNC-201ENST00000341037 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
TNC-201ENST00000341037 ZRANB1Q9UGI0 708 aa13□□□□□ -0.33
TNC-201ENST00000341037 GRM8O00222 908 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 C16orf71Q8IYS4 520 aaPredicted RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
TNC-201ENST00000341037 NEMFO60524 1076 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 RBM25P49756 843 aaKnown RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 ZNF830Q96NB3 372 aaPredicted RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 KDM5BQ9UGL1 1544 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 KRT13P13646 458 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 OGFOD1Q8N543 542 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 GIMAP7Q8NHV1 300 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 GNG11P61952 73 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 ASIC1P78348 528 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 DHX58Q96C10 678 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
TNC-201ENST00000341037 PTGS1P23219 599 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 ARID5AQ03989 594 aa12.99□□□□□ -0.33
TNC-201ENST00000341037 CCDC175P0C221 793 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 AKAP4Q5JQC9 854 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 DDB1Q16531 1140 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 C8orf58Q8NAV2 365 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 PPP1R14CQ8TAE6 165 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 ACTN2P35609 894 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 FAM107BQ9H098 131 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 IKBKGQ9Y6K9 419 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.98□□□□□ -0.33
TNC-201ENST00000341037 PARP3Q9Y6F1 533 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 HCLS1P14317 486 aaPredicted RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 IFI16Q16666 785 aaKnown RBP12.98□□□□□ -0.33
TNC-201ENST00000341037 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 IL16Q14005 1332 aa12.98□□□□□ -0.33
TNC-201ENST00000341037 AKR1B10O60218 316 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 KIAA0753Q2KHM9 967 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 HSF2BPO75031 334 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 MICALCLQ6ZW33 695 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 RRP36Q96EU6 259 aaKnown RBP12.97□□□□□ -0.33
TNC-201ENST00000341037 FERP16591 822 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 MAP3K9P80192 1104 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 SSX2IPQ9Y2D8 614 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 RXRAP19793 462 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 MCM7P33993 719 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
TNC-201ENST00000341037 AOPEPQ8N6M6 819 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 PLIN2Q99541 437 aa12.97□□□□□ -0.33
TNC-201ENST00000341037 SAP30BPQ9UHR5 308 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms