RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 MYH8P13535 1937 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 IFIT1P09914 478 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 CAVIN4Q5BKX8 364 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.19□□□□□ -1.26
SSH1-202ENST00000326495 GOLGA8BA8MQT2 603 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 GNAT2P19087 354 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 NOLC1Q14978 699 aaKnown RBP eCLIP7.19□□□□□ -1.26
SSH1-202ENST00000326495 KLHL10Q6JEL2 608 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 MAATS1Q7Z4T9 603 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 MIPOL1Q8TD10 442 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 MYO5CQ9NQX4 1742 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 BAG3O95817 575 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CTAGE15A4D2H0 777 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CTAGE8P0CG41 777 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 ZNF76P36508 570 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 PDE4BQ07343 736 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CTAGE6Q86UF2 777 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CTAGE4Q8IX94 777 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 DDX23Q9BUQ8 820 aaKnown RBP7.19□□□□□ -1.26
SSH1-202ENST00000326495 NAPBQ9H115 298 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 BABAM1Q9NWV8 329 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 CCDC61Q9Y6R9 512 aa7.19□□□□□ -1.26
SSH1-202ENST00000326495 TAOK1Q7L7X3 1001 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 PRAM1Q96QH2 718 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 NPHP3Q7Z494 1330 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 UBASH3AP57075 661 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 JADE2Q9NQC1 790 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 MTRF1LQ9UGC7 380 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 ABCA10Q8WWZ4 1543 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 TPCN1Q9ULQ1 816 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 MATR3P43243 847 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSH1-202ENST00000326495 GBP6Q6ZN66 633 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 LUC7L2Q9Y383 392 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 TEX14Q8IWB6 1497 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 GMNNO75496 209 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 CALM1P0DP23 149 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 CALM2P0DP24 149 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 CALM3P0DP25 149 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 MAP3K7CLP57077 242 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 SF3B2Q13435 895 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 LRP2BPQ9P2M1 347 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 PBRM1Q86U86 1689 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 CABP4P57796 275 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 CNGA4Q8IV77 575 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 POLE3Q9NRF9 147 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 PPFIA2O75334 1257 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 MTIF2P46199 727 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 DUOX2Q9NRD8 1548 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 ZSCAN22P10073 491 aaPredicted RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 TTC22Q5TAA0 569 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 GPR161Q8N6U8 529 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 NCAPGQ9BPX3 1015 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 TRMT1Q9NXH9 659 aaKnown RBP7.18□□□□□ -1.26
SSH1-202ENST00000326495 MYH7P12883 1935 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 GAS8O95995 478 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 SSBP05455 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
SSH1-202ENST00000326495 PLCG2P16885 1265 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 SIL1Q9H173 461 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 SSFA2P28290 1259 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
SSH1-202ENST00000326495 A0A1W2PRG0 241 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 CCDC129Q6ZRS4 1044 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ELP1O95163 1332 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ZMYM4Q5VZL5 1548 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 PSMA7O14818 248 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ABCD1P33897 745 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 GSTO1P78417 241 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ARMC9Q7Z3E5 817 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 TRIML1Q8N9V2 468 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 SYKP43405 635 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 APOBRQ0VD83 1088 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 PHLDB2Q86SQ0 1253 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 KRT23Q9C075 422 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 PIK3R4Q99570 1358 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 SKILP12757 684 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 NUCB1Q02818 461 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 BRAPQ7Z569 592 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 RAB3IL1Q8TBN0 382 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 IMPACTQ9P2X3 320 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 SLMAPQ14BN4 828 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 CACNA2D3Q8IZS8 1091 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 UBE4AQ14139 1066 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ANKRD36BQ8N2N9 1353 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
SSH1-202ENST00000326495 RUFY4Q6ZNE9 571 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 ZNF213O14771 459 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 PPP1R2P3Q6NXS1 205 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 CROCCQ5TZA2 2017 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 GJB2P29033 226 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 SARNPP82979 210 aaKnown RBP7.17□□□□□ -1.26
SSH1-202ENST00000326495 FAM69CQ0P6D2 419 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 CCDC174Q6PII3 467 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 OTUD6BQ8N6M0 293 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
SSH1-202ENST00000326495 RASSF4Q9H2L5 321 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 CTNNA2P26232 953 aa7.17□□□□□ -1.26
SSH1-202ENST00000326495 NUTM2GQ5VZR2 741 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms