RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ESR2Q92731 530 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 HOMER2Q9NSB8 354 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 PTGS1P23219 599 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 PLIN2Q99541 437 aa13.58□□□□□ -0.23
SHPRH-201ENST00000275233 NF2P35240 595 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 ZNF165P49910 485 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-201ENST00000275233 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 PARP3Q9Y6F1 533 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 STAMBPO95630 424 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 CWF19L2Q2TBE0 894 aaKnown RBP13.58□□□□□ -0.24
SHPRH-201ENST00000275233 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
SHPRH-201ENST00000275233 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
SHPRH-201ENST00000275233 TOM1O60784 492 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 TRERF1Q96PN7 1200 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
SHPRH-201ENST00000275233 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 ZGPATQ8N5A5 531 aaKnown RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 SNW1Q13573 536 aaKnown RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 TCHPQ9BT92 498 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 DHX58Q96C10 678 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 MCM9Q9NXL9 1143 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
SHPRH-201ENST00000275233 GJA3Q9Y6H8 435 aa13.57□□□□□ -0.24
SHPRH-201ENST00000275233 NBPF7P0C2Y1 421 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 HSPA2P54652 639 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 ARL1P40616 181 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 UBASH3AP57075 661 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 CTR9Q6PD62 1173 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 FAM107BQ9H098 131 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 NCKAP5LQ9HCH0 1330 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 ASIC1P78348 528 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 MRPS9P82933 396 aaKnown RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 NUCB1Q02818 461 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 KRT24Q2M2I5 525 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 BMP2KLQ5H9B9 411 aa13.56□□□□□ -0.24
SHPRH-201ENST00000275233 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
SHPRH-201ENST00000275233 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 IRS4O14654 1257 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 MCM3P25205 808 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 AKAP4Q5JQC9 854 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 ZSCAN22P10073 491 aaPredicted RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 UBE2HP62256 183 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 ANO6Q4KMQ2 910 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 MCM7P33993 719 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
SHPRH-201ENST00000275233 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 OTUD6BQ8N6M0 293 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 AKR1B10O60218 316 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 TNNI2P48788 182 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 GNG11P61952 73 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 TFCP2Q12800 502 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 KRT13P13646 458 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 IL2RBP14784 551 aa13.55□□□□□ -0.24
SHPRH-201ENST00000275233 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 NYXQ9GZU5 481 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 CNNM2Q9H8M5 875 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 CUL7Q14999 1698 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 ACTN2P35609 894 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 GSDMDP57764 484 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 CEP63Q96MT8 703 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 PDE1AP54750 535 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 NSD2O96028 1365 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 ATP2C2O75185 946 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 PPP1R14CQ8TAE6 165 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 TSNARE1Q96NA8 513 aa13.54□□□□□ -0.24
SHPRH-201ENST00000275233 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms