RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 MYO5CQ9NQX4 1742 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 TFCP2Q12800 502 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
COL21A1-201ENST00000244728 UNC5CLQ8IV45 518 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 CDK5RAP3Q96JB5 506 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 TIGD1Q96MW7 591 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 CDKL5O76039 1030 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF496Q96IT1 587 aaPredicted RBP10.73□□□□□ -0.69
COL21A1-201ENST00000244728 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL21A1-201ENST00000244728 BTG4Q9NY30 223 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 ORC3Q9UBD5 711 aaPredicted RBP10.73□□□□□ -0.69
COL21A1-201ENST00000244728 JAG2Q9Y219 1238 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 LAMC1P11047 1609 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 TXLNAP40222 546 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 ZSCAN16Q9H4T2 348 aaPredicted RBP10.73□□□□□ -0.69
COL21A1-201ENST00000244728 UNC13BO14795 1591 aa10.73□□□□□ -0.69
COL21A1-201ENST00000244728 UBAP1LF5GYI3 381 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF75DP51815 510 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 DMTNQ08495 405 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 DDB1Q16531 1140 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF594Q96JF6 807 aaPredicted RBP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 SLC12A7Q9Y666 1083 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 LIG1P18858 919 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 SLC9C2Q5TAH2 1124 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 SOGA3Q5TF21 947 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 CDC37L1Q7L3B6 337 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 DNAI1Q9UI46 699 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 RGS12O14924 1447 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 EDC4Q6P2E9 1401 aaKnown RBP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 KRT18P05783 430 aaKnown RBP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
COL21A1-201ENST00000244728 HMG20BQ9P0W2 317 aa10.72□□□□□ -0.69
COL21A1-201ENST00000244728 TTC41PQ6P2S7 1318 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
COL21A1-201ENST00000244728 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 CLTCL1P53675 1640 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 PTCH1Q13635 1447 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 TMEM2Q9UHN6 1383 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 CCDC70Q6NSX1 233 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 MTMR6Q9Y217 621 aa10.71□□□□□ -0.69
COL21A1-201ENST00000244728 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 ZSCAN12O43309 604 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 TMEM67Q5HYA8 995 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 Q6ZUG5 572 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 RASEFQ8IZ41 740 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 EDC3Q96F86 508 aaKnown RBP10.71□□□□□ -0.7
COL21A1-201ENST00000244728 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.7
COL21A1-201ENST00000244728 KLF18A0A0U1RQI7 1052 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC129Q6ZRS4 1044 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 NBPF5PQ86XG9 351 aaPredicted RBP10.7□□□□□ -0.7
COL21A1-201ENST00000244728 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
COL21A1-201ENST00000244728 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 ERCC6L2Q5T890 1561 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 EPS15P42566 896 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 SYT10Q6XYQ8 523 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 TTC6Q86TZ1 520 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC150Q8NCX0 1101 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 LEO1Q8WVC0 666 aaPredicted RBP10.7□□□□□ -0.7
COL21A1-201ENST00000244728 GTF3C6Q969F1 213 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
COL21A1-201ENST00000244728 ELF2Q15723 593 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 ME3Q16798 604 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 FILIP1LQ4L180 1135 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 TRMT1LQ7Z2T5 733 aaKnown RBP10.7□□□□□ -0.7
COL21A1-201ENST00000244728 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 CLSTN2Q9H4D0 955 aa10.7□□□□□ -0.7
COL21A1-201ENST00000244728 AOX1Q06278 1338 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 SBNO1A3KN83 1393 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 ERLIN1O75477 346 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 RXRAP19793 462 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 ARHGAP29Q52LW3 1261 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 ZSWIM4Q9H7M6 989 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 SSH2Q76I76 1423 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 CASQ1P31415 396 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 IL15P40933 162 aaPredicted RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 IARSP41252 1262 aaKnown RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 MCMDC2Q4G0Z9 681 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 CTCFLQ8NI51 663 aaPredicted RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC102AQ96A19 550 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 KIAA0232Q92628 1395 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 EIF3JO75822 258 aaKnown RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms