RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 RtcbQ99LF4 505 aaKnown RBP30.87■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Pde4bB1AWC9 736 aa30.86■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Psma5Q9Z2U1 241 aaKnown RBP30.86■■■□□ 2.53
Tpm1-216ENSMUST00000113707 DaxxO35613 739 aa30.85■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Polr3dQ91WD1 398 aa30.85■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Fam84aQ9D650 292 aa30.85■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Q9D9S1 216 aa30.85■■■□□ 2.53
Tpm1-216ENSMUST00000113707 1700006A11RikB9EHI3 544 aa30.84■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Pdlim2Q8R1G6 349 aa30.84■■■□□ 2.53
Tpm1-216ENSMUST00000113707 PtmsQ9D0J8 101 aaKnown RBP30.84■■■□□ 2.53
Tpm1-216ENSMUST00000113707 SnrkQ8VDU5 748 aa30.84■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Ly75Q60767 1723 aa30.84■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Setdb1O88974 1307 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Speer4dL7N216 212 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Cyp2d10P24456 504 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Nlrp9aQ66X03 949 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Srp68Q8BMA6 625 aaKnown RBP30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Ube3bQ9ES34 1070 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Pus3Q9JI38 481 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Sh3bp5Q9Z131 463 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Duox1A2AQ92 1551 aa30.83■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Kank4Q6P9J5 1016 aa30.82■■■□□ 2.53
Tpm1-216ENSMUST00000113707 Gm4340L7N2C4 268 aa30.82■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Prl3d1P18121 224 aa30.82■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Sptlc3Q8BG54 563 aa30.82■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Ddit3P35639 168 aa30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Kiaa0753Q6A000 959 aa30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Abtb2Q7TQI7 1024 aa30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Sf3b3Q921M3 1217 aaKnown RBP30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Cdca7lQ922M5 438 aa30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Rufy3Q9D394 469 aa30.81■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Ube4aE9Q735 1028 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Lrrfip2Q91WK0 415 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Chmp4cQ9D7F7 232 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 VeztQ3ZK22 780 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 EappQ5BU09 281 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Il17raQ60943 864 aa30.8■■■□□ 2.52
Tpm1-216ENSMUST00000113707 St18Q80TY4 1045 aa30.79■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Rbm17Q8JZX4 405 aaKnown RBP30.79■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Col3a1P08121 1464 aa30.79■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Tmem143Q8VD26 458 aa30.78■■■□□ 2.52
Tpm1-216ENSMUST00000113707 1700029H14RikE9PY36 240 aa30.78■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Usp44Q8C2S0 711 aa30.78■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Dbndd1Q9CZ00 160 aa30.78■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Ankrd13dQ6PD24 605 aa30.77■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Ssh1Q76I79 1042 aa30.77■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Ubn2Q80WC1 1314 aa30.77■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Map10Q8BJS7 891 aa30.76■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Sp8Q8BMJ8 486 aa30.76■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Gdpd2Q9ESM6 539 aa30.76■■■□□ 2.52
Tpm1-216ENSMUST00000113707 Zfyve9A2A8R0 1397 aa30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Fbxl16A2RT62 479 aa30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Elmsan1E9Q2I4 1089 aaKnown RBP30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Bloc1s4Q8VED2 215 aa30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 IncenpQ9WU62 880 aa30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Gja10Q9WUS4 505 aa30.76■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Myh7Q91Z83 1935 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Hap1O35668 628 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 GabrdP22933 449 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Slc39a11Q8BWY7 342 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 AidaQ8C4Q6 305 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Lmbrd2Q8C561 694 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Pof1bQ8K4L4 587 aa30.75■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Scn11aQ9R053 1765 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Ubap1lG3UW59 384 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Nme8Q715T0 586 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Rps6kb1Q8BSK8 525 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Amhr2Q8K592 568 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Plcb2A3KGF7 1181 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Hmgb2P30681 210 aaKnown RBP30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Syt1P46096 421 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Appbp2Q9DAX9 585 aa30.74■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Hspd1P63038 573 aaKnown RBP30.73■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Zdhhc9P59268 364 aa30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Znf496Q5SXI5 585 aa30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Ptcd1Q8C2E4 695 aaKnown RBP30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Tktl2Q9D4D4 627 aa30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Pkp1P97350 728 aaKnown RBP30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Bag4Q8CI61 457 aa30.72■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Gm45015A0A140LII9 184 aa30.71■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Gm18336A0A140LIU8 765 aa30.71■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Znfx1Q8R151 1909 aaKnown RBP30.7■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Ufl1Q8CCJ3 793 aaKnown RBP30.7■■■□□ 2.51
Tpm1-216ENSMUST00000113707 Eva1cP58659 440 aa30.7■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Irgm2A0A140LIF8 407 aa30.69■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Prl7a2O54831 253 aa30.69■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Rassf8Q8CJ96 419 aa30.69■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Rasa1E9PYG6 1038 aa30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 F2rP30558 430 aa30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Rbm26Q6NZN0 1012 aaKnown RBP30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Trim56Q80VI1 734 aaKnown RBP30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Adam1bQ8R534 806 aa30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Ubr3Q5U430 1889 aa30.68■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Arid3aQ62431 601 aa30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Edrf1Q6GQV7 1239 aa30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Emilin1Q99K41 1017 aa30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Sugp2Q8CH09 1067 aa30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Mrpl50Q8VDT9 159 aaKnown RBP30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Tubb6Q922F4 447 aa30.67■■■□□ 2.5
Tpm1-216ENSMUST00000113707 Myo3bQ1EG27 1305 aa30.66■■■□□ 2.5
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms