RNA–Protein interactions for RNA: ENSMUST00000111198.8

Cd44-208, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-208ENSMUST00000111198 Ehd4Q9EQP2 541 aa9.46□□□□□ -0.9
Cd44-208ENSMUST00000111198 Zdbf2Q5SS00 2493 aaKnown RBP9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 Plcb2A3KGF7 1181 aa9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 PgfP49764 158 aa9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 Clca2Q8BG22 942 aa9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 Fam213aQ9CYH2 218 aa9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 Trim44Q9QXA7 346 aa9.45□□□□□ -0.9
Cd44-208ENSMUST00000111198 Exoc6bA6H5Z3 810 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Hmgb1P63158 215 aaKnown RBP9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Gpatch11Q3UFS4 262 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Gpr101Q80T62 511 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Sde2Q8K1J5 448 aaKnown RBP9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Trim26Q99PN3 545 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Upf1Q9EPU0 1124 aaKnown RBP9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Catsper2A2ARP9 588 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 NmiO35309 314 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Lrch1P62046 709 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 EappQ5BU09 281 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ttc19Q8CC21 365 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Cluap1Q8R3P7 413 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Dydc2Q9D3X8 139 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Chmp4bQ9D8B3 224 aaKnown RBP9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Adarb2Q9JI20 745 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ppp1r3fQ9JIG4 799 aa9.44□□□□□ -0.9
Cd44-208ENSMUST00000111198 Oas2E9Q9A9 742 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Chrna5Q2MKA5 467 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 SkilQ60665 675 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ddrgk1Q80WW9 315 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ccdc60Q8C4J0 545 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Myo3bQ1EG27 1305 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Rbm46P86049 533 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ripor2Q80U16 1078 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Kif18aQ91WD7 886 aa9.43□□□□□ -0.9
Cd44-208ENSMUST00000111198 Nrxn2E9Q7X7 1710 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ccdc171E9Q1U1 1324 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 4931408C20RikE9PWP9 1381 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Trim34bJ3QNR8 485 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Atp6v1aP50516 617 aaKnown RBP9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Plcb3P51432 1234 aaKnown RBP9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 NfixP70257 488 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Stxbp5lQ5DQR4 1185 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 HellsQ60848 821 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Gja3Q64448 417 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Mphosph10Q810V0 681 aaKnown RBP9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Znf330Q922H9 316 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Myoz2Q9JJW5 264 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Trpm7Q923J1 1863 aa9.42□□□□□ -0.9
Cd44-208ENSMUST00000111198 Gm10093D3YYI8 482 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Hdac1O09106 482 aaKnown RBP9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Rps8P62242 208 aaKnown RBP9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Lmbr1lQ9D1E5 489 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Glt1d1A4FUP9 346 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 PnnO35691 725 aaKnown RBP9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 SobpQ0P5V2 864 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Wwc1Q5SXA9 1104 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Cavin2Q63918 418 aaKnown RBP9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Best3Q6H1V1 669 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Plekhm2Q80TQ5 1018 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Cetn4Q8K4K1 168 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Glis2Q8VDL9 521 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Kif2cQ922S8 721 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Map3k15A2AQW0 1331 aa9.41□□□□□ -0.9
Cd44-208ENSMUST00000111198 Pappa2E9PZ87 1789 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Slc4a9E9PUP3 929 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Dcdc2bF7BCK0 340 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Eif6O55135 245 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Aifm3Q3TY86 605 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Ccdc85aQ5SP85 500 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Paxip1Q6NZQ4 1056 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Naa16Q9DBB4 864 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Lgr5Q9Z1P4 907 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 Tspoap1Q7TNF8 1846 aa9.4□□□□□ -0.9
Cd44-208ENSMUST00000111198 EvplQ9D952 2035 aa9.4□□□□□ -0.91
Cd44-208ENSMUST00000111198 Eddm13E9Q7F5 164 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Zap70P43404 618 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 G3bp1P97855 465 aaKnown RBP9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Bend3Q6PAL0 825 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Tmco5bQ80X59 307 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 DmtnQ9WV69 405 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Gdf11Q9Z1W4 405 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Cfdp1O88271 295 aaKnown RBP9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Il4rP16382 810 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Nectin2P32507 530 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Map3k13Q1HKZ5 959 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Map9Q3TRR0 646 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Psmd1Q3TXS7 953 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 VeztQ3ZK22 780 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Plekhg6Q8R0J1 787 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Ly6iQ9WU67 134 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Heg1E9Q7X6 1337 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 NynrinQ5DTZ0 1840 aa9.39□□□□□ -0.91
Cd44-208ENSMUST00000111198 Ecm29Q6PDI5 1840 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 Brd1E9PZ26 1189 aaKnown RBP9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 Pnmal2G3X9N3 661 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 Tpm2P58774 284 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 Tom1l2Q5SRX1 507 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 DaglaQ6WQJ1 1044 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 HlfQ8BW74 295 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 NinQ61043 2035 aa9.38□□□□□ -0.91
Cd44-208ENSMUST00000111198 Col1a1P11087 1453 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms