RNA–Protein interactions for RNA: ENSMUST00000110302.7

Clcn3-205, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

TSL 5 BASIC

Gene Clcn3, Length 3,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-205ENSMUST00000110302 Casq1O09165 405 aa10.15□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Chmp3Q9CQ10 224 aa10.15□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Dmrtc1Q9D9R7 182 aa10.15□□□□□ -0.78
Clcn3-205ENSMUST00000110302 Setdb1O88974 1307 aa10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 TnksQ6PFX9 1320 aa10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Anxa1P10107 346 aaKnown RBP10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 EvcP57680 1005 aa10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 HmcesQ8R1M0 353 aaKnown RBP10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 PhaxQ9JJT9 385 aaKnown RBP10.15□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Dock5B2RY04 1868 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ugt1a5B2RT14 529 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ddx46Q569Z5 1032 aaKnown RBP10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 BcanQ61361 883 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Map10Q8BJS7 891 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Usp44Q8C2S0 711 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ube3bQ9ES34 1070 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Elmsan1E9Q2I4 1089 aaKnown RBP10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 GalcP54818 684 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Atp2b3Q0VF55 1220 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Zc3h12cQ5DTV4 884 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Slx4ipQ9D7Y9 413 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Hmg20bQ9Z104 317 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Nup188Q6ZQH8 1759 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ddx19aQ61655 478 aaKnown RBP10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 NgdnQ9DB96 315 aaKnown RBP10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Plekho1Q9JIY0 408 aa10.14□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Smarce1O54941 411 aaKnown RBP10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Nme8Q715T0 586 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ints3Q7TPD0 1041 aaKnown RBP10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Fam160b2Q80YR2 744 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Sptlc3Q8BG54 563 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Zkscan1Q8BGS3 561 aaKnown RBP10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Golim4Q8BXA1 655 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Aknad1E9Q8N6 675 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Zdhhc9P59268 364 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Stk11ipQ3TAA7 1072 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Abtb2Q7TQI7 1024 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Tti2Q8BGV4 512 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Erc1Q99MI1 1120 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Rufy3Q9D394 469 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Stox1B2RQL2 990 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Prl3d1P18121 224 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gjb2Q00977 226 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gimap8Q75N62 688 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Rab3gap1Q80UJ7 981 aa10.13□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Myo3bQ1EG27 1305 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ube4aE9Q735 1028 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gm4340L7N2C4 268 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Slc39a11Q8BWY7 342 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 KinQ8K339 391 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Atf7Q8R0S1 413 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Fam84aQ9D650 292 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Mapk8ip1Q9WVI9 707 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 CltaO08585 235 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Riok1Q922Q2 567 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Pus3Q9JI38 481 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Kank4Q6P9J5 1016 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Sh3bp5Q9Z131 463 aa10.12□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Carmil3Q3UFQ8 1375 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Nlrp9aQ66X03 949 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Ptcd1Q8C2E4 695 aaKnown RBP10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Cdca7lQ922M5 438 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Foxo3Q9WVH4 672 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 GabrdP22933 449 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Atp6v1dP57746 247 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Edrf1Q6GQV7 1239 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Srp68Q8BMA6 625 aaKnown RBP10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Phactr2B1AVP0 632 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Znf496Q5SXI5 585 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Shisa4Q8CA71 197 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 RtcbQ99LF4 505 aaKnown RBP10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Lgr5Q9Z1P4 907 aa10.11□□□□□ -0.79
Clcn3-205ENSMUST00000110302 AfdnQ9QZQ1 1820 aaKnown RBP10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Chd5A2A8L1 1946 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 1700029H14RikE9PY36 240 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Hspd1P63038 573 aaKnown RBP10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Cchcr1Q8K2I2 770 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Amhr2Q8K592 568 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Kcnn1Q9EQR3 537 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 IncenpQ9WU62 880 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 EvplQ9D952 2035 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Speer4dL7N216 212 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Filip1lQ6P6L0 1131 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Rps6kb1Q8BSK8 525 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gripap1Q8VD04 806 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Lrrfip2Q91WK0 415 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gja10Q9WUS4 505 aa10.1□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Pkp1P97350 728 aaKnown RBP10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Rnf20Q5DTM8 973 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 HdlbpQ8VDJ3 1268 aaKnown RBP10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Bloc1s4Q8VED2 215 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Sik3Q6P4S6 1311 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Myh2G3UW82 1942 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Hmgb2P30681 210 aaKnown RBP10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Vars2Q3U2A8 1060 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Polr3dQ91WD1 398 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Itgb4A2A863 1818 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Rbm17Q8JZX4 405 aaKnown RBP10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Appbp2Q9DAX9 585 aa10.09□□□□□ -0.79
Clcn3-205ENSMUST00000110302 Gdpd2Q9ESM6 539 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms