RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm21985Q6P6P5 1106 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Cdca8Q8BHX3 289 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Farp2Q91VS8 1065 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Pde3aQ9Z0X4 1141 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Wnk3Q80XP9 1757 aa15.18■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ccdc112A0AUP1 442 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Kcna6Q61923 529 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ifit1Q64282 463 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Dixdc1Q80Y83 711 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Tlcd1Q99JT6 247 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Syt10Q9R0N4 523 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Prl3d3A0A0M6L0J6 224 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Stx1aO35526 288 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Rrp1P56183 494 aaKnown RBP15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ccdc129Q14B48 1034 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 NfkbibQ60778 359 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 CtifQ6PEE2 600 aaKnown RBP15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Hook1Q8BIL5 728 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Golim4Q8BXA1 655 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 Pus3Q9JI38 481 aa15.17■□□□□ 0.02
Nup88-203ENSMUST00000108531 FocadA2AKG8 1798 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Syde2E9PUP1 1314 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Sos2Q02384 1333 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ccz1Q8C1Y8 480 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Ssfa2Q922B9 1252 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Fam50bQ9WTJ8 334 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Zbtb40Q6PCS8 1258 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Tmc2Q8R4P4 888 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Trim59Q922Y2 403 aa15.16■□□□□ 0.02
Nup88-203ENSMUST00000108531 Cyp2d10P24456 504 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Exosc10P56960 887 aaKnown RBP15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Card10P58660 1021 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Dnaaf2Q8BPI1 814 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 4930572O03RikQ8C5Y0 211 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Efcab2Q9CQ46 164 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Rrs1Q9CYH6 365 aaKnown RBP15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Abca3Q8R420 1704 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 ZyxQ62523 564 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Atg9aQ68FE2 551 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Gpatch3Q8BIY1 525 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Trim52Q8CDV4 233 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Slain2Q8CI08 581 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Fam13bQ8K2H3 851 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Flad1Q8R123 492 aa15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Pes1Q9EQ61 584 aaKnown RBP15.15■□□□□ 0.02
Nup88-203ENSMUST00000108531 Npc1l1Q6T3U4 1333 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Rgs9O54828 675 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cct2P80314 535 aaKnown RBP15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 GnpatP98192 678 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Fsd1Q7TPM6 496 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Nxf7Q80SZ6 620 aaKnown RBP15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Pms1Q8K119 917 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Rufy2Q8R4C2 606 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Pcdhb15Q91Y04 786 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Kiaa0754Q69ZZ9 979 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Fam102bQ8BQS4 339 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Lmbrd2Q8C561 694 aa15.14■□□□□ 0.01
Nup88-203ENSMUST00000108531 Fbxo2Q80UW2 297 aa15.13■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ano10Q8BH79 659 aa15.13■□□□□ 0.01
Nup88-203ENSMUST00000108531 Atad2Q8CDM1 1040 aa15.13■□□□□ 0.01
Nup88-203ENSMUST00000108531 Eif3bQ8JZQ9 803 aaKnown RBP15.13■□□□□ 0.01
Nup88-203ENSMUST00000108531 Nlrp3Q8R4B8 1033 aa15.13■□□□□ 0.01
Nup88-203ENSMUST00000108531 Dync1i1O88485 628 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Hspd1P63038 573 aaKnown RBP15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ncaph2Q8BSP2 607 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Krt25Q8VCW2 446 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Snw1Q9CSN1 536 aaKnown RBP15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Mrc1Q61830 1456 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Abca15E9PWH4 1668 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 TrhQ62361 256 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 CrebrfQ8CDG5 640 aaKnown RBP15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Rdm1Q9CQK3 281 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Col4a3bpQ9EQG9 624 aa15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Usp42B2RQC2 1324 aaKnown RBP15.12■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ms4a1P19437 291 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Tnnt2P50752 301 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Timm10P62073 90 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 AidaQ8C4Q6 305 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Dusp10Q9ESS0 483 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Nrxn3Q6P9K9 1571 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Atp2b3Q0VF55 1220 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Atp1a3Q6PIC6 1013 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Slu7Q8BHJ9 585 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Kcnk13Q8R1P5 405 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Dnaaf4Q8R368 420 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ccer1Q9CQL2 403 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Cwc25Q9DBF7 416 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Stard3nlQ9DCI3 235 aa15.11■□□□□ 0.01
Nup88-203ENSMUST00000108531 Prl3d2F6R3P9 224 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Lrrc8aQ80WG5 810 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ints4Q8CIM8 964 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Chmp3Q9CQ10 224 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Ank1Q02357 1862 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gm21663A0A0G2JE01 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gm7361D3Z6R1 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 5031410I06RikE9Q4E0 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gm1979E9QAN3 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gm5862K7N5V5 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Gm10220K7N660 267 aa15.1■□□□□ 0.01
Nup88-203ENSMUST00000108531 Eya2O08575 532 aa15.1■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms