RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Msl1Q6PDM1 616 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tti2Q8BGV4 512 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Dis3l2Q8CI75 870 aaKnown RBP12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ncoa5Q91W39 579 aaKnown RBP12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 RarsQ9D0I9 660 aaKnown RBP12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 IncenpQ9WU62 880 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Setd1aE9PYH6 1716 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Prpf4bQ61136 1007 aaKnown RBP12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Drc7Q6V3W6 876 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Sgsm1Q8BPQ7 1093 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Sel1lQ9Z2G6 790 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 PtprmP28828 1452 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 DymQ8CHY3 669 aa12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Wdr33Q8K4P0 1330 aaKnown RBP12.63□□□□□ -0.39
Msh3-201ENSMUST00000022220 Gabpb2P81069 414 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Itga6Q61739 1091 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tmem266Q8BZB3 538 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Dbndd1Q9CZ00 160 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cfap157Q0VFX2 523 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Mns1Q61884 491 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Zbtb1Q91VL9 713 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 TnksQ6PFX9 1320 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Col1a2Q01149 1372 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 TnrQ8BYI9 1358 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Kifc2O08672 792 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Hap1O35668 628 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 AcrbpQ3V140 540 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Abtb2Q7TQI7 1024 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ufl1Q8CCJ3 793 aaKnown RBP12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Atg3Q9CPX6 314 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Mrps25Q9D125 171 aaKnown RBP12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Letm1Q9Z2I0 738 aa12.62□□□□□ -0.39
Msh3-201ENSMUST00000022220 Slc7a3P70423 618 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ccar2Q8VDP4 922 aaKnown RBP12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cdhr2E9Q7P9 1308 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tshz2Q68FE9 1030 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Pm20d1Q8C165 503 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Myo5cE9Q1F5 1742 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 CltaO08585 235 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Stx8O88983 236 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Myl3P09542 204 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Stat1P42225 749 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Zbtb40Q6PCS8 1258 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Fnbp4Q6ZQ03 1031 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Spag5Q7TME2 1165 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cnot6lQ8VEG6 555 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Zkscan5Q9Z1D8 819 aa12.61□□□□□ -0.39
Msh3-201ENSMUST00000022220 Kri1Q8VDQ9 704 aaKnown RBP12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ginm1Q91WR6 327 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 UvssaQ9D479 717 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 AceP09470 1312 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cdk12Q14AX6 1484 aaKnown RBP12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Vwa3bJ9JI28 736 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Myl10Q62082 202 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Kank4Q6P9J5 1016 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Cdca7lQ922M5 438 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Hecw2Q6I6G8 1578 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Dhx8A2A4P0 1244 aaKnown RBP12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Syt1P46096 421 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Limch1Q3UH68 1057 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tmx1Q8VBT0 278 aa12.6□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tyro3P55144 880 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Paxbp1P58501 919 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Terf1P70371 421 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Prdm1Q60636 856 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ppp4r3aQ6P2K6 820 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Fam160b2Q80YR2 744 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Stox1B2RQL2 990 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Iqsec3Q3TES0 1195 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tubb6Q922F4 447 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Pus3Q9JI38 481 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Pard3Q99NH2 1333 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Zscan20B2KFW1 1030 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Hoxa7P02830 229 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Unc5clQ6R653 518 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Trim29Q8R2Q0 587 aa12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 IkQ9Z1M8 557 aaKnown RBP12.59□□□□□ -0.39
Msh3-201ENSMUST00000022220 Bin1O08539 588 aaKnown RBP12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Mtx1P47802 317 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Frat1P70339 274 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ccdc102aQ3TMW1 549 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Brinp3Q499E0 766 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Tut1Q8R3F9 869 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Ubxn4Q8VCH8 506 aa12.58□□□□□ -0.39
Msh3-201ENSMUST00000022220 Itsn2Q9Z0R6 1659 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Slc4a4O88343 1079 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Zscan22Q8BGS5 496 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cdca7Q9D0M2 382 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Arglu1Q3UL36 271 aaKnown RBP12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 HellsQ60848 821 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Gm21985Q6P6P5 1106 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Slu7Q8BHJ9 585 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Nek11Q8C0Q4 628 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Emilin2Q8K482 1074 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 RtcbQ99LF4 505 aaKnown RBP12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Znf704Q9ERQ3 566 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Cdc45Q9Z1X9 566 aa12.58□□□□□ -0.4
Msh3-201ENSMUST00000022220 Irx2P81066 474 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Wdr93Q402B2 695 aa12.57□□□□□ -0.4
Msh3-201ENSMUST00000022220 Lrrc59Q922Q8 307 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms