RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 LINC00346Q8IVM7 164 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF679Q8IYX0 411 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 EID2Q8N6I1 236 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 MR1Q95460 341 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CST11Q9H112 138 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 AUNIPQ9H7T9 357 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 FBXL3Q9UKT7 428 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ARPC4-TTLL3A0A0A6YYG9 625 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 H0YIG0 161 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 TSPAN4O14817 238 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 AKR1D1P51857 326 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF362Q5T0B9 420 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 EEF1A1P5Q5VTE0 462 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 OVCH1Q7RTY7 1134 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 GLCCI1Q86VQ1 547 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PPP1R3BQ86XI6 285 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 GLB1L2Q8IW92 636 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 INO80EQ8NBZ0 244 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 GIMAP1Q8WWP7 306 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 C4orf45Q96LM5 186 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SFXN2Q96NB2 322 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 DCBLD2Q96PD2 775 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 PHF7Q9BWX1 381 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 RSPO3Q9BXY4 272 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 FKRPQ9H9S5 495 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ADGRL4Q9HBW9 690 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCNN3Q9UGI6 736 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF223Q9UK11 482 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 DTX4Q9Y2E6 619 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CENPEQ02224 2701 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SULT2B1O00204 365 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CSF1P09603 554 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 LIPCP11150 499 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 IFNGR1P15260 489 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CLDN20P56880 219 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CHAF1BQ13112 559 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 MELKQ14680 651 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 COL13A1Q5TAT6 717 aaPredicted RBP5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 BPIFB2Q8N4F0 458 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC22A8Q8TCC7 542 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 CTHRC1Q96CG8 243 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 ABHD6Q9BV23 337 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC6A15Q9H2J7 730 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 RNF215Q9Y6U7 377 aa5.13□□□□□ -1.59
SYNCRIP-204ENST00000616122 A0A1B0GX78 115 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 MT-ATP6P00846 226 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 AFF3P51826 1226 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 C17orf67Q0P5P2 114 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 FUT7Q11130 342 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EIF2B1Q14232 305 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RBMS2Q15434 407 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 LSRQ86X29 649 aaPredicted RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 FOXRED2Q8IWF2 684 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR7G1Q8NGA0 311 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 CCDC74AQ96AQ1 378 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 TM4SF19Q96DZ7 209 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 KTI12Q96EK9 354 aaPredicted RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC41A2Q96JW4 573 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC6A7Q99884 636 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 NUDT22Q9BRQ3 303 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 NUDT9Q9BW91 350 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 COQ3Q9NZJ6 369 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 MIA3Q5JRA6 1907 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SBF1O95248 1867 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 GREB1Q4ZG55 1949 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 TEX13DA0A0J9YY54 714 aaPredicted RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM235A6NFC5 223 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 A6NIZ1 184 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RGS13O14921 159 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 PTP4A3O75365 173 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SRFP11831 508 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SDHBP21912 280 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 HTR2CP28335 458 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EVI2BP34910 448 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 PNLIPRP2P54317 469 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RAP1BP61224 184 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RPL27P61353 136 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RAP1AP62834 184 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EBPQ15125 230 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SGCBQ16585 318 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC22A6Q4U2R8 563 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 CCDC36Q8IYA8 594 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 FAM174AQ8TBP5 190 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 NEK7Q8TDX7 302 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 ASB17Q8WXJ9 295 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZCCHC14Q8WYQ9 949 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 ANKRD9Q96BM1 317 aaPredicted RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 RBM24Q9BX46 236 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SEMA4CQ9C0C4 833 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EVA1BQ9NVM1 165 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 CGGBP1Q9UFW8 167 aaPredicted RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 CHRNA9Q9UGM1 479 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCNG2Q9UJ96 466 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF346Q9UL40 294 aaKnown RBP5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EMC9Q9Y3B6 208 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 TRAV1-2A0A0B4J238 106 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR4C45A6NMZ5 311 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 EEF1E1-BLOC1S5C9J1V9 151 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 SIX6O95475 246 aa5.12□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGHV4-34P06331 123 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms