RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 A4GNTQ9UNA3 340 aa17.8■□□□□ 0.44
SDCBP-209ENST00000522243 J3KTA2 159 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 ENTPD5O75356 428 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 SLC2A10O95528 541 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 TGFAP01135 160 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 THRBP10828 461 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 IFI30P13284 250 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 GIFP27352 417 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 EVX1P49640 407 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 DAP3P51398 398 aaKnown RBP17.79■□□□□ 0.44
SDCBP-209ENST00000522243 RPS23P62266 143 aaKnown RBP17.79■□□□□ 0.44
SDCBP-209ENST00000522243 ST3GAL3Q11203 375 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 TOP3AQ13472 1001 aaPredicted RBP17.79■□□□□ 0.44
SDCBP-209ENST00000522243 ALKBH6Q3KRA9 238 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 SLC36A2Q495M3 483 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 ARMC4Q5T2S8 1044 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 VTCN1Q7Z7D3 282 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 SLC15A3Q8IY34 581 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 RP9Q8TA86 221 aaKnown RBP17.79■□□□□ 0.44
SDCBP-209ENST00000522243 LIPHQ8WWY8 451 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 PRRC1Q96M27 445 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 CDH20Q9HBT6 801 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 SNX13Q9Y5W8 968 aa17.79■□□□□ 0.44
SDCBP-209ENST00000522243 RNF212BA8MTL3 300 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 LILRA1O75019 489 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 IGF2P01344 180 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 COX4I1P13073 169 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 IL2RGP31785 369 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 CDAP32320 146 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 ERVS71-1P61550 626 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 LIPEQ05469 1076 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 FMODQ06828 376 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 TRIP10Q15642 601 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 HSP90B2PQ58FF3 399 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 LZICQ8WZA0 190 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 NSMAFQ92636 917 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 SEPHS2Q99611 448 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 MS4A5Q9H3V2 200 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 LPAR3Q9UBY5 353 aa17.78■□□□□ 0.44
SDCBP-209ENST00000522243 IGKV1D-43A0A0B4J1Z2 117 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 A0A1W2PPW3 197 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 SLC22A2O15244 555 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 HPXP02790 462 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 TSPAN19P0C672 248 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 NAT2P11245 290 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 CHN2P52757 468 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 CD47Q08722 323 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 ALG10Q5BKT4 473 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 RGS7BPQ6MZT1 257 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-209ENST00000522243 HDDC2Q7Z4H3 204 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 IGFN1Q86VF2 1251 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 RBM15BQ8NDT2 890 aaKnown RBP17.77■□□□□ 0.44
SDCBP-209ENST00000522243 BPIFA2Q96DR5 249 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 SNX18Q96RF0 628 aa17.77■□□□□ 0.44
SDCBP-209ENST00000522243 IQCMA0A1B0GVH7 501 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 CENPBD1B2RD01 187 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 CXCR6O00574 342 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 NME4O00746 187 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 GSTA4O15217 222 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF682O95780 498 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 CLPTM1O96005 669 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 LCKP06239 509 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 TACSTD2P09758 323 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 MAKP20794 623 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 COL8A2P25067 703 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 IFNA8P32881 189 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 MDH1P40925 334 aaKnown RBP17.76■□□□□ 0.43
SDCBP-209ENST00000522243 SLC7A2P52569 658 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF133P52736 654 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-209ENST00000522243 PLP2Q04941 152 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 RIN1Q13671 783 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 TBC1D28Q2M2D7 210 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ELFN2Q5R3F8 820 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 FAM120AOSQ5T036 256 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 C10orf128Q5T292 105 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ARPINQ7Z6K5 226 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 DPPA2Q7Z7J5 298 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 CLDN22Q8N7P3 220 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ICA1LQ8NDH6 482 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 SPATA3Q8NHX4 192 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 TSPAN32Q96QS1 320 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 FNDC11Q9BVV2 318 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 TXNIPQ9H3M7 391 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 STX18Q9P2W9 335 aaKnown RBP17.76■□□□□ 0.43
SDCBP-209ENST00000522243 ZNF346Q9UL40 294 aaKnown RBP17.76■□□□□ 0.43
SDCBP-209ENST00000522243 HIF3AQ9Y2N7 669 aa17.76■□□□□ 0.43
SDCBP-209ENST00000522243 IFNW1P05000 195 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 MMP7P09237 267 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-209ENST00000522243 SAGP10523 405 aaPredicted RBP17.75■□□□□ 0.43
SDCBP-209ENST00000522243 APEX1P27695 318 aaKnown RBP17.75■□□□□ 0.43
SDCBP-209ENST00000522243 CTXN1P60606 82 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 HSF2Q03933 536 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 SGCAQ16586 387 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 NRN1LQ496H8 165 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 TREML1Q86YW5 311 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 NRMQ8IXM6 262 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 CPEB3Q8NE35 698 aaKnown RBP17.75■□□□□ 0.43
SDCBP-209ENST00000522243 OR51A7Q8NH64 312 aa17.75■□□□□ 0.43
SDCBP-209ENST00000522243 NMD3Q96D46 503 aaKnown RBP17.75■□□□□ 0.43
SDCBP-209ENST00000522243 KCNN2Q9H2S1 579 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms