RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 LINGO2Q7L985 606 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 THAP5Q7Z6K1 395 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 CPOQ8IVL8 374 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 GID4Q8IVV7 300 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 GABRG1Q8N1C3 465 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 SYT14Q8NB59 555 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 PTP4A1Q93096 173 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 BOD1Q96IK1 185 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 HCAR1Q9BXC0 346 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 NUAK2Q9H093 628 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 GPR35Q9HC97 309 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 PRSS50Q9UI38 385 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 MOKQ9UQ07 419 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 SLC5A6Q9Y289 635 aa11.06□□□□□ -0.64
TRAPPC12-218ENST00000479897 CACNA1CQ13936 2221 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 FAM183AA6NL82 134 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF99A8MXY4 864 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 DCTN6O00399 190 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 DHHO43323 396 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 KHDRBS3O75525 346 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 QDPRP09417 244 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 BMP5P22003 454 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 MPGP29372 298 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 BLVRAP53004 296 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 ROR2Q01974 943 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 LGALS3BPQ08380 585 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 TMED1Q13445 227 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 FBXL19-AS1Q494R0 122 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 LINC01590Q5TEZ4 76 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 PLBD1Q6P4A8 553 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 OR6V1Q8N148 313 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 OR9Q1Q8NGQ5 310 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 APH1BQ8WW43 257 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 Q96MT0 163 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 IL4I1Q96RQ9 567 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 TAS2R16Q9NYV7 291 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 UPB1Q9UBR1 384 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 ERRFI1Q9UJM3 462 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 B9D1Q9UPM9 204 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 LRRC42Q9Y546 428 aa11.05□□□□□ -0.64
TRAPPC12-218ENST00000479897 UBR5O95071 2799 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 RELNP78509 3460 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 SH3D21A4FU49 640 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 CCDC182A6NF36 153 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 SLC22A31A6NKX4 558 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 A8MXE2 369 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 SLC16A7O60669 478 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 KRT33AO76009 404 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 GLCEO94923 617 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 HRGP04196 525 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ITGA5P08648 1049 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 GAAP10253 952 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ASCL1P50553 236 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF84P51523 738 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 MRPS34P82930 218 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 IL5RAQ01344 420 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 GLO1Q04760 184 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 GGTLC2Q14390 218 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 P2RY6Q15077 328 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 CEACAM16Q2WEN9 425 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 LCN1P1Q5VSP4 162 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF474Q6S9Z5 364 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 LIX1LQ8IVB5 337 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 UBE2J2Q8N2K1 259 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF610Q8N9Z0 462 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 C1orf162Q8NEQ5 155 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 BBS1Q8NFJ9 593 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 LILRB4Q8NHJ6 448 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 KISS1RQ969F8 398 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 RFKQ969G6 155 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 UBE2FQ969M7 185 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 ZNF582Q96NG8 517 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 MED20Q9H944 212 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 MARCH7Q9H992 704 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 HAO2Q9NYQ3 351 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
TRAPPC12-218ENST00000479897 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 EEF1E1-BLOC1S5C9J1V9 151 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 EEF1E1O43324 174 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 GYPBP06028 91 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 CLUP10909 449 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 PSMB1P20618 241 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 LAP3P28838 519 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 HTR1FP30939 366 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 CDH11P55287 796 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 CXCR4P61073 352 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 FAPQ12884 760 aa11.03□□□□□ -0.64
TRAPPC12-218ENST00000479897 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms