RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 F13BP05160 661 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 LYNX1P0DP58 116 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF250P15622 560 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 ACADSP16219 412 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 PCMT1P22061 227 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 IL2RGP31785 369 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 ARFIP2P53365 341 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 SEC24CP53992 1094 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 CDH15P55291 814 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 RUNX1T1Q06455 604 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 KLF10Q13118 480 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 PIN1Q13526 163 aaPredicted RBP12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 DEF8Q6ZN54 512 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 IL17RELQ6ZVW7 336 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 PCYOX1LQ8NBM8 494 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 TMEM255BQ8WV15 326 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 C10orf82Q8WW14 230 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF347Q96SE7 839 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 BCL2L14Q9BZR8 327 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 LRMDAQ9H2I8 198 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 RNF121Q9H920 327 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 SMURF2Q9HAU4 748 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 CDH20Q9HBT6 801 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 SAR1AQ9NR31 198 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 GID8Q9NWU2 228 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 MYEF2Q9P2K5 600 aaKnown RBP12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 DUSP13Q9UII6 198 aa12.32□□□□□ -0.44
SNRNP40-203ENST00000463988 NBEAL1Q6ZS30 2694 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 IGLV3-9A0A075B6K5 115 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 IQCMA0A1B0GVH7 501 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 A0A1W2PPW3 197 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 B4DSR2 109 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 TRMUO75648 421 aaKnown RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 SASH3O75995 380 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 HPXP02790 462 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 NR2C1P13056 603 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 KDELR2P33947 212 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 AQP2P41181 271 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 RAD52P43351 418 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 GPR6P46095 362 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 DVL1P1P54792 670 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 PLP2Q04941 152 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 MAD2L1BPQ15013 274 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 TAF11Q15544 211 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 TRIP10Q15642 601 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 TBC1D28Q2M2D7 210 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 KRTAP24-1Q3LI83 254 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 CYBRD1Q53TN4 286 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 ARMC4Q5T2S8 1044 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 PAQR4Q8N4S7 273 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 SYT14Q8NB59 555 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF519Q8TB69 540 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 C11orf40Q8WZ69 217 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 SLCO1C1Q9NYB5 712 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 AP3M1Q9Y2T2 418 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 MED31Q9Y3C7 131 aa12.31□□□□□ -0.44
SNRNP40-203ENST00000463988 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 FAM220BPB1ANY3 271 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 SLC22A2O15244 555 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 TCN1P20061 433 aaPredicted RBP12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 TNFRSF1BP20333 461 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 COL8A2P25067 703 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 IFNA8P32881 189 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 OR1E2P47887 323 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 UCP2P55851 309 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 KLF3P57682 345 aaPredicted RBP12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 ST3GAL3Q11203 375 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 MOGQ16653 247 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 PCGF3Q3KNV8 242 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 OR2T12Q8NG77 320 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 SYNPRQ8TBG9 265 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 ZNF416Q9BWM5 594 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 KCNN2Q9H2S1 579 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 HINT3Q9NQE9 182 aaKnown RBP12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 FGFR1OP2Q9NVK5 253 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 NKIRAS2Q9NYR9 191 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 FZR1Q9UM11 496 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 HIF3AQ9Y2N7 669 aa12.3□□□□□ -0.44
SNRNP40-203ENST00000463988 LOC100653049A0A140TA62 436 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 C17orf100A8MU93 164 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 RP2O75695 350 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 KRT34O76011 436 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 TFP02787 698 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 LCKP06239 509 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 FAM157BP0CG42 384 aa12.29□□□□□ -0.44
SNRNP40-203ENST00000463988 NAT2P11245 290 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms