RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RPTNQ6XPR3 784 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 SYT14Q8NB59 555 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 OR6N2Q8NGY6 317 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 OR14L1PQ8NHC6 308 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 SLC39A7Q92504 469 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 ADAD1Q96M93 576 aaKnown RBP17.73■□□□□ 0.43
COPS7A-218ENST00000543939 KCTD7Q96MP8 289 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 HDHD5Q9BXW7 423 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 GNG8Q9UK08 70 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 GRIP1Q9Y3R0 1128 aa17.73■□□□□ 0.43
COPS7A-218ENST00000543939 A0A0J9YW62 118 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 GJE1A6NN92 205 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 ALOX5APP20292 161 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 SOX6P35712 828 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 RRADP55042 308 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 SRSF6Q13247 344 aaKnown RBP17.72■□□□□ 0.43
COPS7A-218ENST00000543939 DCTN2Q13561 401 aaKnown RBP17.72■□□□□ 0.43
COPS7A-218ENST00000543939 TMEM225Q6GV28 225 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 TMEM91Q6ZNR0 172 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 EGFL6Q8IUX8 553 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 KCNE4Q8WWG9 221 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 PGLYRP3Q96LB9 341 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 MED18Q9BUE0 208 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 PLGRKTQ9HBL7 147 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 MRPL22Q9NWU5 206 aaKnown RBP17.72■□□□□ 0.43
COPS7A-218ENST00000543939 DMXL1Q9Y485 3027 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 IL1AP01583 271 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 PSKH1P11801 424 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 PTGS2P35354 604 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 SIRPAP78324 504 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 CAMK2BQ13554 666 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 RTP5Q14D33 572 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 TRAM1Q15629 374 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 DNM1P34Q6PK57 102 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 KCTD20Q7Z5Y7 419 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 EMC6Q9BV81 110 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 MRPL13Q9BYD1 178 aaKnown RBP17.72■□□□□ 0.43
COPS7A-218ENST00000543939 HES7Q9BYE0 225 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 AKIP1Q9NQ31 210 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 ACOXLQ9NUZ1 547 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 RASD1Q9Y272 281 aa17.72■□□□□ 0.43
COPS7A-218ENST00000543939 COA3Q9Y2R0 106 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-218ENST00000543939 NKX2-8O15522 239 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 EIF1BO60739 113 aaKnown RBP17.71■□□□□ 0.43
COPS7A-218ENST00000543939 RGS9O75916 674 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-218ENST00000543939 CDRT1O95170 752 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 HLA-DQA2P01906 255 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 GDF1P27539 372 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 CSNK2A1P68400 391 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-218ENST00000543939 FMODQ06828 376 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 SLC3A1Q07837 685 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 INSL4Q14641 139 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 CDK5R1Q15078 307 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 ZNF829Q3KNS6 432 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-218ENST00000543939 CCDC58Q4VC31 144 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 RPL22L1Q6P5R6 122 aaKnown RBP17.71■□□□□ 0.43
COPS7A-218ENST00000543939 PLEKHG7Q6ZR37 379 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 DPY19L4Q7Z388 723 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 GPAT4Q86UL3 456 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 MDS2Q8NDY4 140 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 DTNBP1Q96EV8 351 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 FOXN4Q96NZ1 517 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 BARHL1Q9BZE3 327 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 GALNT8Q9NY28 637 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 LAMP5Q9UJQ1 280 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 POLHQ9Y253 713 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 TMEM14AQ9Y6G1 99 aa17.71■□□□□ 0.43
COPS7A-218ENST00000543939 CD8B2A6NJW9 211 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 CENPBD1B2RD01 187 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 ZNF593O00488 134 aaPredicted RBP17.7■□□□□ 0.42
COPS7A-218ENST00000543939 TRAPPC6AO75865 159 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 CD1AP06126 327 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 CD8BP10966 210 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 GLO1Q04760 184 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 WIPI1Q5MNZ9 446 aaPredicted RBP17.7■□□□□ 0.42
COPS7A-218ENST00000543939 AGAP7PQ5VUJ5 663 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 SULF2Q8IWU5 870 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 OTOSQ8NHW6 89 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 RNF166Q96A37 237 aaPredicted RBP17.7■□□□□ 0.42
COPS7A-218ENST00000543939 SFXN2Q96NB2 322 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 AGAP4Q96P64 663 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 SNTG1Q9NSN8 517 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 MRM2Q9UI43 246 aaKnown RBP17.7■□□□□ 0.42
COPS7A-218ENST00000543939 FREM2Q5SZK8 3169 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 FAM186AA6NE01 2351 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 GVINP1Q7Z2Y8 2422 aa17.7■□□□□ 0.42
COPS7A-218ENST00000543939 IGKV1D-43A0A0B4J1Z2 117 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 A6NL46 340 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 PSMD9O00233 223 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 TNFSF11O14788 317 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 PHYHO14832 338 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 KHDRBS3O75525 346 aaKnown RBP17.69■□□□□ 0.42
COPS7A-218ENST00000543939 ABHD16AO95870 558 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 ZNF43P17038 809 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 WT1P19544 449 aaPredicted RBP17.69■□□□□ 0.42
COPS7A-218ENST00000543939 SDC2P34741 201 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 RPS27P42677 84 aaKnown RBP17.69■□□□□ 0.42
COPS7A-218ENST00000543939 CD97P48960 835 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 RORCP51449 518 aa17.69■□□□□ 0.42
COPS7A-218ENST00000543939 EGR3Q06889 387 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms