RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
SGCA-201ENST00000262018 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.52
SGCA-201ENST00000262018 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 CD8B2A6NJW9 211 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 SNTNA6NMZ2 147 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 TRIM3O75382 744 aaPredicted RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 INMTO95050 263 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 NUDT14O95848 222 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 FADS2O95864 444 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 CH25HO95992 272 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 DBTP11182 482 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 CXCR1P25024 350 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 C21orf33P30042 268 aaPredicted RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 SLC6A6P31641 620 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 POLR2HP52434 150 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 GP2P55259 537 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 RPS4XP62701 263 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 ZNF91Q05481 1191 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 ZNF74Q16587 644 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 SYT6Q5T7P8 510 aaPredicted RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 AADACL4Q5VUY2 407 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 GRINAQ7Z429 371 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 BCDIN3DQ7Z5W3 292 aaKnown RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 CROCCP3Q8IVE0 287 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 PM20D2Q8IYS1 436 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 OR51A7Q8NH64 312 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
SGCA-201ENST00000262018 TMEM171Q8WVE6 324 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 ST8SIA1Q92185 356 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 RORBQ92753 470 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 PLEKHA8Q96JA3 519 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 CDCA4Q9BXL8 241 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 REG4Q9BYZ8 158 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 FN3KQ9H479 309 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 GALNT9Q9HCQ5 603 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 QPCTLQ9NXS2 382 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 IL20RAQ9UHF4 553 aa11.81□□□□□ -0.52
SGCA-201ENST00000262018 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 LRRC3CA6NJW4 275 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 A8MV72 311 aaPredicted RBP11.8□□□□□ -0.52
SGCA-201ENST00000262018 ETV2O00321 342 aaPredicted RBP11.8□□□□□ -0.52
SGCA-201ENST00000262018 GMFGO60234 142 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 NDUFB2O95178 105 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 CCNA2P20248 432 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 HTR3AP46098 478 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 FOXF2Q12947 444 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 CLEC12BQ2HXU8 276 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 ANKDD1AQ495B1 522 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 RNLSQ5VYX0 342 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 TMEM234Q8WY98 164 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 WFIKKN1Q96NZ8 548 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 IFT27Q9BW83 186 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 PRDM14Q9GZV8 571 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 CMC2Q9NRP2 79 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 GPR52Q9Y2T5 361 aa11.8□□□□□ -0.52
SGCA-201ENST00000262018 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 TMED7-TICAM2A0A0A6YYA0 188 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 B4DXG7 233 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 LRRN3E7EW58 273 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 SNPHO15079 494 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 SLC22A1O15245 554 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 KCNAB3O43448 404 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 SLC2A10O95528 541 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 ASAH2BP0C7U1 165 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 PEPDP12955 493 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 PAX1P15863 534 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 GDF1P27539 372 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 SRSF2Q01130 221 aaKnown RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
SGCA-201ENST00000262018 SLC25A53Q5H9E4 307 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 TIGD3Q6B0B8 471 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 C5orf46Q6UWT4 87 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 ADGRG3Q86Y34 549 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 ANKRD13BQ86YJ7 626 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 LRRC17Q8N6Y2 441 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 OR1J4Q8NGS1 313 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 STK35Q8TDR2 534 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 RFKQ969G6 155 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 C12orf43Q96C57 262 aaKnown RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 TMEM80Q96HE8 168 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 GPX7Q96SL4 187 aaPredicted RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 FKRPQ9H9S5 495 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 HINT3Q9NQE9 182 aaKnown RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 ZNF701Q9NV72 531 aaPredicted RBP11.79□□□□□ -0.52
SGCA-201ENST00000262018 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.79□□□□□ -0.52
SGCA-201ENST00000262018 TMED7Q9Y3B3 224 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
SGCA-201ENST00000262018 TRAV36DV7A0A075B6V5 113 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 TMEM72A0PK05 275 aa11.78□□□□□ -0.52
SGCA-201ENST00000262018 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms