RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZDHHC5Q9C0B5 715 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 LIN7BQ9HAP6 207 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 LYRM4Q9HD34 91 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 HINT3Q9NQE9 182 aaKnown RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 NCDNQ9UBB6 729 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 COLQQ9Y215 455 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 VDAC3Q9Y277 283 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 B3GALT1Q9Y5Z6 326 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TRAV36DV7A0A075B6V5 113 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 CXorf51AA0A1B0GTR3 108 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 RAB19A4D1S5 217 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 KDM4EB2RXH2 506 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 JMJD7P0C870 316 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ELK1P19419 428 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 CHATP28329 748 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TACR3P29371 465 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 IDH3GP51553 393 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 RPL23AP62750 156 aaKnown RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 COX15Q7KZN9 410 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TRAPPC6BQ86SZ2 158 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 NKAIN4Q8IVV8 208 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 ARPC5LQ9BPX5 153 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TMEM59Q9BXS4 323 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 SLIRPQ9GZT3 109 aaKnown RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 HRH4Q9H3N8 390 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 LTB4R2Q9NPC1 389 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 EHFQ9NZC4 300 aa7.74□□□□□ -1.17
VPS36-201ENST00000378060 TMEFF2Q9UIK5 374 aaPredicted RBP7.74□□□□□ -1.17
VPS36-201ENST00000378060 LOC100289279A0A1B0GTE1 492 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CTNSO60931 367 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 HOXB5P09067 269 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 LIPCP11150 499 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 HOXA9P31269 272 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SFTPDP35247 375 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 PGFP49763 221 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 POLR2HP52434 150 aaKnown RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 PER3P56645 1201 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 MRPS21P82921 87 aaKnown RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 POU3F1Q03052 451 aaPredicted RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 FAM122BQ7Z309 247 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 LIMS2Q7Z4I7 341 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CAMKMTQ7Z624 323 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 TDHQ8IZJ6 230 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SLC22A24Q8N4F4 322 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SUMF2Q8NBJ7 301 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 OR14A16Q8NHC5 309 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 NPRL2Q8WTW4 380 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 FAM3DQ96BQ1 224 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SFXN2Q96NB2 322 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SLC46A1Q96NT5 459 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SRRQ9GZT4 340 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SCPEP1Q9HB40 452 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 STARD5Q9NSY2 213 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 REV1Q9UBZ9 1251 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 C19orf53Q9UNZ5 99 aaPredicted RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 FBXO7Q9Y3I1 522 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 PLXNA3P51805 1871 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 F5P12259 2224 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CIB4A0PJX0 185 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SMCO3A2RU48 225 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 A6NLC8 198 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 I6L893 689 aaPredicted RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 K7EPK0 472 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 PEX11BO96011 259 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 RAC2P15153 192 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 BCL6P41182 706 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 EFNA3P52797 238 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SQSTM1Q13501 440 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ZNF385BQ569K4 471 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CCDC190Q86UF4 302 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 FAM71E2Q8N5Q1 922 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 OR1S1Q8NH92 325 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 NANOS1Q8WY41 292 aaKnown RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 MS4A6EQ96DS6 147 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ARHGAP9Q9BRR9 750 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ZNF416Q9BWM5 594 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 RAB22AQ9UL26 194 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 YARS2Q9Y2Z4 477 aaKnown RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 HCFC2Q9Y5Z7 792 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 COL4A4P53420 1690 aaPredicted RBP7.73□□□□□ -1.17
VPS36-201ENST00000378060 A0A1B0GTL3 188 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 A0A1B0GV50 99 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 hCG_1807616A0A1W2PRN6 198 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 GMDSO60547 372 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 KCNK2O95069 426 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CHRM2P08172 466 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CSF3P09919 207 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 NAGAP17050 411 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ATP1B3P54709 279 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 CLDN20P56880 219 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ACSM1Q08AH1 577 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 PLA2G7Q13093 441 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ARHGAP11BQ3KRB8 267 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 XAF1Q6GPH4 301 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 OR51D1Q8NGF3 324 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 ZFPM2Q8WW38 1151 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 RAB3CQ96E17 227 aa7.73□□□□□ -1.17
VPS36-201ENST00000378060 SDF2Q99470 211 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms