RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 TMEM156Q8N614 296 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 OR5J2Q8NH18 312 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 TTC9Q92623 222 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 UFD1Q92890 307 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 C4orf36Q96KX1 117 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 BCL7BQ9BQE9 202 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 FKRPQ9H9S5 495 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 TXNL4BQ9NX01 149 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 GRHPRQ9UBQ7 328 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 IL17BQ9UHF5 180 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ZNF229Q9UJW7 825 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 STUB1Q9UNE7 303 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SF3B6Q9Y3B4 125 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 DCHS1Q96JQ0 3298 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 NCKAP5O14513 1909 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SPENQ96T58 3664 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 IRGMA1A4Y4 181 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 METTL15A6NJ78 407 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 CDRT1O95170 752 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 IMPDH2P12268 514 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SDHAP31040 664 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SFTPDP35247 375 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ACVR1BP36896 505 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 DLSTP36957 453 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 PSMB10P40306 273 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SH3BGRP55822 239 aaPredicted RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 SLC3A1Q07837 685 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 TCF15Q12870 199 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 TGIF1Q15583 401 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ETFDHQ16134 617 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ACKR1Q16570 336 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 PLPPR5Q32ZL2 321 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 FAM69AQ5T7M9 428 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 LINC01590Q5TEZ4 76 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 ARL9Q6T311 187 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 MAMDC2Q7Z304 686 aaPredicted RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 OR2M3Q8NG83 312 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 OR13C5Q8NGS8 318 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 RNF138Q8WVD3 245 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 LIPHQ8WWY8 451 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 LIN37Q96GY3 246 aaPredicted RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 GPX7Q96SL4 187 aaPredicted RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 CNN2Q99439 309 aaKnown RBP5.62□□□□□ -1.51
CLK1-210ENST00000473565 BARHL1Q9BZE3 327 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 SPRY4Q9C004 299 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 C12orf10Q9HB07 376 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 P4HTMQ9NXG6 502 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 QPCTLQ9NXS2 382 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 KLHL21Q9UJP4 597 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 KLHDC2Q9Y2U9 406 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 MGAQ8IWI9 3026 aa5.62□□□□□ -1.51
CLK1-210ENST00000473565 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 LOC101059948A0A1B0GTJ6 334 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SHISA3A0PJX4 238 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 FTCDNL1E5RQL4 147 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CTDSP2O14595 271 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 NCR1O76036 304 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 AKR7A3O95154 331 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PSKH1P11801 424 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 NAGAP17050 411 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 TGM1P22735 817 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 DNASE1L1P49184 302 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CENPAP49450 140 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SSR4P51571 173 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ZNF41P51814 821 aaPredicted RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 GPR85P60893 370 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 DNASE1L3Q13609 305 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TPBGQ13641 420 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ATP1A4Q13733 1029 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PON3Q15166 354 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 EXT1Q16394 746 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MOGQ16653 247 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ZNF404Q494X3 552 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 FAM27D1Q5T7N8 215 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 ATP1A1-AS1Q5TC04 95 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MISPQ8IVT2 679 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SLC35F2Q8IXU6 374 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 OR6V1Q8N148 313 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PRSS33Q8NF86 280 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 KBTBD8Q8NFY9 601 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 OR4K17Q8NGC6 315 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 OR6Q1Q8NGQ2 317 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 TMEM234Q8WY98 164 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CCNL2Q96S94 520 aaPredicted RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 ALG12Q9BV10 488 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 NMNAT2Q9BZQ4 307 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 NUAK2Q9H093 628 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PROK2Q9HC23 129 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 MED29Q9NX70 200 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SSR3Q9UNL2 185 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 CEP295Q9C0D2 2601 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 PLPP3O14495 311 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 OR6A2O95222 327 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 SDC2P34741 201 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 DIO1P49895 249 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 RPS15P62841 145 aaKnown RBP5.61□□□□□ -1.51
CLK1-210ENST00000473565 GALEQ14376 348 aa5.61□□□□□ -1.51
CLK1-210ENST00000473565 STPG1Q5TH74 334 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms