RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 GMPSP49915 693 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 UBE2E1P51965 193 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 HNRNPFP52597 415 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ATP1B3P54709 279 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CDH4P55283 916 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 RAP1BP61224 184 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 AKAP17AQ02040 695 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF763Q0D2J5 394 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 NPRL3Q12980 569 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ALCAMQ13740 583 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 EXOSC2Q13868 293 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SIM2Q14190 667 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CYTH1Q15438 398 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC9A3R2Q15599 337 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 MAPRE1Q15691 268 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CST6Q15828 149 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ATP6AP1Q15904 470 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 GUCA2BQ16661 112 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CDO1Q16878 200 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 MAP9Q49MG5 647 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 TMEM69Q5SWH9 247 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF562Q6V9R5 426 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 STAC2Q6ZMT1 411 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZNF571Q7Z3V5 609 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 NET1Q7Z628 596 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 FAM219AQ8IW50 185 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 THNSL1Q8IYQ7 743 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 TAGAPQ8N103 731 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CENPSQ8N2Z9 138 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CHCHD4Q8N4Q1 142 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 C2orf73Q8N5S3 287 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC35G3Q8N808 338 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 NEK11Q8NG66 645 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 OR4K5Q8NGD3 323 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 OR4L1Q8NH43 312 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 CIRBP-AS1Q8TBR5 109 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SAP25Q8TEE9 199 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 VMP1Q96GC9 406 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SMIM10Q96HG1 83 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 RSRC1Q96IZ7 334 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SCLT1Q96NL6 688 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ODF3Q96PU9 254 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SEC62Q99442 399 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 KLHDC3Q9BQ90 382 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 KATNB1Q9BVA0 655 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 FUNDC2Q9BWH2 189 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 GANQ9H2C0 597 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SRMSQ9H3Y6 488 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 TUBA4BQ9H853 241 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLCO1B3Q9NPD5 702 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ISYNA1Q9NPH2 558 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 MRPL17Q9NRX2 175 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 DDX28Q9NUL7 540 aaKnown RBP-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 HOXC10Q9NYD6 342 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ERVK-18Q9QC07 812 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 NPIPA1Q9UND3 350 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 PLA2G4CQ9UP65 541 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 TRAF3IP3Q9Y228 551 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 KMT2AQ03164 3969 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 ADAMTS13Q76LX8 1427 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 PDZD2O15018 2839 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 NF1P21359 2839 aa-0.66□□□□□ -2.52
RNU6-54P-201ENST00000365563 BRD4O60885 1362 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 HIVEP1P15822 2718 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 IGF2RP11717 2491 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 IGKV3D-7A0A0C4DH55 119 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 IGKV3OR2-268A0A0C4DH90 116 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 A0A0U1RQV1 116 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 A0A1W2PNM2 257 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 CEACAM18A8MTB9 384 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 H3BRN7 92 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 CLDN34H7C241 214 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 PSMA7O14818 248 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 SELENOFO60613 162 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 RP2O75695 350 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 RAD51DO75771 328 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 REC8O95072 547 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 GAS8O95995 478 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 CYB5R3P00387 301 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 HLA-DPB1P04440 258 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 RPN1P04843 607 aaKnown RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 PYGLP06737 847 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 ZFYP08048 801 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC35G6P0C7Q6 338 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 BCKDHAP12694 445 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 ABOP16442 354 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 DTYMKP23919 212 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 ADSSP30520 456 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 OTX1P32242 354 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 MC5RP33032 325 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 CTNNA1P35221 906 aaKnown RBP-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 PRKCIP41743 596 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 MAGEA12P43365 314 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 TNFSF10P50591 281 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 PPP1CBP62140 327 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 IL1RL1Q01638 556 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 SLC34A1Q06495 639 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 TGM3Q08188 693 aa-0.67□□□□□ -2.52
RNU6-54P-201ENST00000365563 CHAF1BQ13112 559 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms