RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeastyeast

Gene MSS18, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS18YPR134W REH1Q06709 432 aa3.88□□□□□ -1.79
MSS18YPR134W YDL124WQ07551 312 aaKnown RBP3.88□□□□□ -1.79
MSS18YPR134W HAL9Q12180 1030 aa3.88□□□□□ -1.79
MSS18YPR134W NDJ1Q12366 352 aa3.88□□□□□ -1.79
MSS18YPR134W HBN1Q96VH4 193 aa3.88□□□□□ -1.79
MSS18YPR134W SGS1P35187 1447 aa3.87□□□□□ -1.79
MSS18YPR134W PRC1P00729 532 aa3.87□□□□□ -1.79
MSS18YPR134W HCA4P20448 770 aaKnown RBP3.87□□□□□ -1.79
MSS18YPR134W SAP190P36123 1033 aa3.87□□□□□ -1.79
MSS18YPR134W HUL4P40985 892 aa3.87□□□□□ -1.79
MSS18YPR134W YJL163CP46996 555 aa3.87□□□□□ -1.79
MSS18YPR134W SSY5P47002 699 aa3.87□□□□□ -1.79
MSS18YPR134W YJL049WP47048 450 aa3.87□□□□□ -1.79
MSS18YPR134W UBX5Q06682 500 aa3.87□□□□□ -1.79
MSS18YPR134W MRH1Q12117 320 aaPredicted RBP3.87□□□□□ -1.79
MSS18YPR134W ATG11Q12527 1178 aa3.87□□□□□ -1.79
MSS18YPR134W YLR415CO13578 112 aa3.86□□□□□ -1.79
MSS18YPR134W LAT1P12695 482 aaKnown RBP3.86□□□□□ -1.79
MSS18YPR134W DAL7P21826 554 aa3.86□□□□□ -1.79
MSS18YPR134W ILV6P25605 309 aaKnown RBP3.86□□□□□ -1.79
MSS18YPR134W EMC3P36039 253 aa3.86□□□□□ -1.79
MSS18YPR134W YBR053CP38235 358 aa3.86□□□□□ -1.79
MSS18YPR134W UBP6P43593 499 aaKnown RBP3.86□□□□□ -1.79
MSS18YPR134W MUS81Q04149 632 aaPredicted RBP3.86□□□□□ -1.79
MSS18YPR134W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
MSS18YPR134W PRP4P20053 465 aaKnown RBP3.85□□□□□ -1.79
MSS18YPR134W PAM1P37304 830 aaKnown RBP3.85□□□□□ -1.79
MSS18YPR134W SAK1P38990 1142 aa3.85□□□□□ -1.79
MSS18YPR134W TAD1P53065 400 aa3.85□□□□□ -1.79
MSS18YPR134W LGE1Q02796 332 aaKnown RBP3.85□□□□□ -1.79
MSS18YPR134W YDR514CQ04408 483 aa3.85□□□□□ -1.79
MSS18YPR134W SGO1Q08490 590 aa3.85□□□□□ -1.79
MSS18YPR134W YOR022CQ12204 715 aa3.85□□□□□ -1.79
MSS18YPR134W TY1B-DR4Q07793 1604 aa3.84□□□□□ -1.79
MSS18YPR134W TOM70P07213 617 aaKnown RBP3.84□□□□□ -1.79
MSS18YPR134W DMC1P25453 334 aa3.84□□□□□ -1.79
MSS18YPR134W YBR259WP38338 688 aa3.84□□□□□ -1.79
MSS18YPR134W SIC1P38634 284 aa3.84□□□□□ -1.79
MSS18YPR134W PCL5P38794 229 aa3.84□□□□□ -1.79
MSS18YPR134W SET5P38890 526 aaKnown RBP3.84□□□□□ -1.79
MSS18YPR134W ZDS1P50111 915 aaKnown RBP3.84□□□□□ -1.79
MSS18YPR134W MRPS35P53292 345 aa3.84□□□□□ -1.79
MSS18YPR134W YAP1802P53309 568 aa3.84□□□□□ -1.79
MSS18YPR134W SSL2Q00578 843 aa3.84□□□□□ -1.79
MSS18YPR134W CIT1P00890 479 aa3.83□□□□□ -1.8
MSS18YPR134W TOP3P13099 656 aa3.83□□□□□ -1.8
MSS18YPR134W RAD4P14736 754 aa3.83□□□□□ -1.8
MSS18YPR134W KIN3P22209 435 aa3.83□□□□□ -1.8
MSS18YPR134W FMP52P40008 231 aa3.83□□□□□ -1.8
MSS18YPR134W YIL166CP40445 542 aa3.83□□□□□ -1.8
MSS18YPR134W SHR5P41912 237 aa3.83□□□□□ -1.8
MSS18YPR134W PFA3P42836 336 aa3.83□□□□□ -1.8
MSS18YPR134W YGR125WP53273 1036 aa3.83□□□□□ -1.8
MSS18YPR134W YGR283CP53336 341 aaPredicted RBP3.83□□□□□ -1.8
MSS18YPR134W THI21Q08975 551 aa3.83□□□□□ -1.8
MSS18YPR134W KOG1P38873 1557 aa3.82□□□□□ -1.8
MSS18YPR134W GGA2P38817 585 aaKnown RBP3.82□□□□□ -1.8
MSS18YPR134W ECM1P39715 212 aa3.82□□□□□ -1.8
MSS18YPR134W SNM1P40993 198 aa3.82□□□□□ -1.8
MSS18YPR134W ALG2P43636 503 aa3.82□□□□□ -1.8
MSS18YPR134W TIM54P47045 478 aa3.82□□□□□ -1.8
MSS18YPR134W MTR3P48240 250 aaPredicted RBP3.82□□□□□ -1.8
MSS18YPR134W TEL2P53038 688 aa3.82□□□□□ -1.8
MSS18YPR134W HIS7P33734 552 aaKnown RBP3.81□□□□□ -1.8
MSS18YPR134W TDP1P38319 544 aa3.81□□□□□ -1.8
MSS18YPR134W REV7P38927 245 aa3.81□□□□□ -1.8
MSS18YPR134W VPS73P53142 486 aaKnown RBP3.81□□□□□ -1.8
MSS18YPR134W YBP2P53169 641 aa3.81□□□□□ -1.8
MSS18YPR134W TAF8Q03750 510 aa3.81□□□□□ -1.8
MSS18YPR134W LRS4Q04087 347 aaKnown RBP3.81□□□□□ -1.8
MSS18YPR134W GAD1Q04792 585 aa3.81□□□□□ -1.8
MSS18YPR134W SWR1Q05471 1514 aa3.8□□□□□ -1.8
MSS18YPR134W PPZ2P33329 710 aa3.8□□□□□ -1.8
MSS18YPR134W CBR1P38626 284 aaKnown RBP3.8□□□□□ -1.8
MSS18YPR134W NOP7P53261 605 aaKnown RBP3.8□□□□□ -1.8
MSS18YPR134W ATP25Q03153 612 aa3.8□□□□□ -1.8
MSS18YPR134W COQ11Q05892 277 aa3.8□□□□□ -1.8
MSS18YPR134W IRC13Q08630 104 aa3.8□□□□□ -1.8
MSS18YPR134W TGL5Q12043 749 aa3.8□□□□□ -1.8
MSS18YPR134W DIF1O13577 133 aa3.79□□□□□ -1.8
MSS18YPR134W TUB1P09733 447 aaKnown RBP3.79□□□□□ -1.8
MSS18YPR134W YCL002CP25565 263 aa3.79□□□□□ -1.8
MSS18YPR134W BCD1P38772 366 aa3.79□□□□□ -1.8
MSS18YPR134W RLP7P40693 322 aaKnown RBP3.79□□□□□ -1.8
MSS18YPR134W BAP3P41815 604 aa3.79□□□□□ -1.8
MSS18YPR134W GYP8P43570 497 aa3.79□□□□□ -1.8
MSS18YPR134W TAH11P47112 604 aa3.79□□□□□ -1.8
MSS18YPR134W UBC11P52492 156 aa3.79□□□□□ -1.8
MSS18YPR134W ZIP2P53061 704 aa3.79□□□□□ -1.8
MSS18YPR134W FLC1Q08967 793 aa3.79□□□□□ -1.8
MSS18YPR134W YNL162W-AQ3E7A8 72 aa3.79□□□□□ -1.8
MSS18YPR134W YBR182C-AQ8TGU6 64 aa3.79□□□□□ -1.8
MSS18YPR134W PEX2P32800 271 aa3.78□□□□□ -1.8
MSS18YPR134W HOS4P40480 1083 aa3.78□□□□□ -1.8
MSS18YPR134W IMO32P53219 342 aa3.78□□□□□ -1.8
MSS18YPR134W SMX3P54999 86 aaPredicted RBP3.78□□□□□ -1.8
MSS18YPR134W MET7Q08645 548 aa3.78□□□□□ -1.8
MSS18YPR134W RPN13O13563 156 aa3.77□□□□□ -1.81
MSS18YPR134W PHR1P05066 565 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
MSS18YPR134W MET6P05694 767 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms