RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W RPS13P05756 151 aaKnown RBP3.1□□□□□ -1.91
BRO1YPL084W HIS5P07172 385 aa3.1□□□□□ -1.91
BRO1YPL084W HMG1P12683 1054 aa3.1□□□□□ -1.91
BRO1YPL084W MIH1P23748 554 aa3.1□□□□□ -1.91
BRO1YPL084W YFL052WP43551 465 aa3.1□□□□□ -1.91
BRO1YPL084W THI21Q08975 551 aa3.1□□□□□ -1.91
BRO1YPL084W HMI1Q12039 706 aa3.1□□□□□ -1.91
BRO1YPL084W CDC6P09119 513 aa3.09□□□□□ -1.91
BRO1YPL084W GAS1P22146 559 aaKnown RBP3.09□□□□□ -1.91
BRO1YPL084W SED4P25365 1065 aa3.09□□□□□ -1.91
BRO1YPL084W PRP19P32523 503 aaKnown RBP3.09□□□□□ -1.91
BRO1YPL084W SDP1P40479 209 aa3.09□□□□□ -1.91
BRO1YPL084W URM1P40554 99 aaPredicted RBP3.09□□□□□ -1.91
BRO1YPL084W SSY5P47002 699 aa3.09□□□□□ -1.91
BRO1YPL084W SPT20P50875 604 aa3.09□□□□□ -1.91
BRO1YPL084W ZIP2P53061 704 aa3.09□□□□□ -1.91
BRO1YPL084W MTQ2Q03920 221 aaPredicted RBP3.09□□□□□ -1.91
BRO1YPL084W UPC2Q12151 913 aa3.09□□□□□ -1.91
BRO1YPL084W Q0142Q9ZZW4 58 aa3.09□□□□□ -1.91
BRO1YPL084W RPP2AP05319 106 aaKnown RBP3.09□□□□□ -1.92
BRO1YPL084W TOM20P35180 183 aa3.09□□□□□ -1.92
BRO1YPL084W AIM3P38266 947 aaKnown RBP3.09□□□□□ -1.92
BRO1YPL084W YHR078WP38799 552 aa3.09□□□□□ -1.92
BRO1YPL084W CKB2P38930 258 aa3.09□□□□□ -1.92
BRO1YPL084W YJR096WP47137 282 aa3.09□□□□□ -1.92
BRO1YPL084W YAP6Q03935 383 aa3.09□□□□□ -1.92
BRO1YPL084W ACK1Q07622 623 aaPredicted RBP3.09□□□□□ -1.92
BRO1YPL084W YKR051WP36142 418 aa3.08□□□□□ -1.92
BRO1YPL084W CTF8P38877 133 aa3.08□□□□□ -1.92
BRO1YPL084W GPP1P41277 250 aaKnown RBP3.08□□□□□ -1.92
BRO1YPL084W CHA4P43634 648 aa3.08□□□□□ -1.92
BRO1YPL084W VPS62P53285 467 aa3.08□□□□□ -1.92
BRO1YPL084W YDR132CQ03900 495 aa3.08□□□□□ -1.92
BRO1YPL084W HFD1Q04458 532 aa3.08□□□□□ -1.92
BRO1YPL084W RPN7Q06103 429 aaKnown RBP3.08□□□□□ -1.92
BRO1YPL084W YPL277CQ08989 487 aa3.08□□□□□ -1.92
BRO1YPL084W CCR4P31384 837 aaKnown RBP3.08□□□□□ -1.92
BRO1YPL084W TSA1P34760 196 aaKnown RBP3.08□□□□□ -1.92
BRO1YPL084W FLR1P38124 548 aa3.08□□□□□ -1.92
BRO1YPL084W BNA2P47125 453 aa3.08□□□□□ -1.92
BRO1YPL084W NCS6P53088 359 aa3.08□□□□□ -1.92
BRO1YPL084W NOP12Q08208 459 aaKnown RBP3.08□□□□□ -1.92
BRO1YPL084W CDC20P26309 610 aa3.07□□□□□ -1.92
BRO1YPL084W SAK1P38990 1142 aa3.07□□□□□ -1.92
BRO1YPL084W FOL1P53848 824 aa3.07□□□□□ -1.92
BRO1YPL084W CDA2Q06703 312 aa3.07□□□□□ -1.92
BRO1YPL084W YLR149CQ99296 730 aa3.07□□□□□ -1.92
BRO1YPL084W SOD2P00447 233 aa3.07□□□□□ -1.92
BRO1YPL084W STE14P32584 239 aa3.07□□□□□ -1.92
BRO1YPL084W MSS4P38994 779 aa3.07□□□□□ -1.92
BRO1YPL084W PLB1P39105 664 aa3.07□□□□□ -1.92
BRO1YPL084W PZF1P39933 429 aa3.07□□□□□ -1.92
BRO1YPL084W MTR3P48240 250 aaPredicted RBP3.07□□□□□ -1.92
BRO1YPL084W PRP43P53131 767 aaKnown RBP3.07□□□□□ -1.92
BRO1YPL084W NPC2Q12408 173 aa3.07□□□□□ -1.92
BRO1YPL084W TMA17Q12513 150 aa3.07□□□□□ -1.92
BRO1YPL084W TOD6P34219 525 aa3.06□□□□□ -1.92
BRO1YPL084W MNN4P36044 1178 aa3.06□□□□□ -1.92
BRO1YPL084W VHR1P40522 640 aa3.06□□□□□ -1.92
BRO1YPL084W YJR120WP47157 116 aa3.06□□□□□ -1.92
BRO1YPL084W YLR224WQ05947 369 aa3.06□□□□□ -1.92
BRO1YPL084W SWM1Q12379 170 aa3.06□□□□□ -1.92
BRO1YPL084W RNQ1P25367 405 aa3.05□□□□□ -1.92
BRO1YPL084W AVT1P47082 602 aa3.05□□□□□ -1.92
BRO1YPL084W ASM4Q05166 528 aa3.05□□□□□ -1.92
BRO1YPL084W YTM1Q12024 460 aaPredicted RBP3.05□□□□□ -1.92
BRO1YPL084W SEC21P32074 935 aaKnown RBP3.05□□□□□ -1.92
BRO1YPL084W YKR018CP36114 725 aa3.05□□□□□ -1.92
BRO1YPL084W TDA3P38758 523 aa3.05□□□□□ -1.92
BRO1YPL084W MUS81Q04149 632 aaPredicted RBP3.05□□□□□ -1.92
BRO1YPL084W KCS1Q12494 1050 aa3.05□□□□□ -1.92
BRO1YPL084W EUG1P32474 517 aa3.04□□□□□ -1.92
BRO1YPL084W OAF1P39720 1047 aaPredicted RBP3.04□□□□□ -1.92
BRO1YPL084W PFA3P42836 336 aa3.04□□□□□ -1.92
BRO1YPL084W GZF3P42944 551 aaKnown RBP3.04□□□□□ -1.92
BRO1YPL084W YGR153WP48238 217 aa3.04□□□□□ -1.92
BRO1YPL084W RIM8P53179 542 aa3.04□□□□□ -1.92
BRO1YPL084W PEX19Q07418 342 aa3.04□□□□□ -1.92
BRO1YPL084W TUB3P09734 445 aaKnown RBP3.04□□□□□ -1.92
BRO1YPL084W PRP6P19735 899 aaPredicted RBP3.04□□□□□ -1.92
BRO1YPL084W CAD1P24813 409 aaKnown RBP3.04□□□□□ -1.92
BRO1YPL084W LST4P34239 828 aa3.04□□□□□ -1.92
BRO1YPL084W PAF1P38351 445 aa3.04□□□□□ -1.92
BRO1YPL084W NIT1P40447 199 aa3.04□□□□□ -1.92
BRO1YPL084W PCL10P53124 433 aa3.04□□□□□ -1.92
BRO1YPL084W ASI2P53895 289 aa3.04□□□□□ -1.92
BRO1YPL084W PKH1Q03407 766 aa3.04□□□□□ -1.92
BRO1YPL084W PRP4P20053 465 aaKnown RBP3.03□□□□□ -1.92
BRO1YPL084W MRC1P25588 1096 aa3.03□□□□□ -1.92
BRO1YPL084W MIP6P38760 659 aaKnown RBP3.03□□□□□ -1.92
BRO1YPL084W RET2P43621 546 aa3.03□□□□□ -1.92
BRO1YPL084W ORC4P54791 529 aa3.03□□□□□ -1.92
BRO1YPL084W ARP4P80428 489 aa3.03□□□□□ -1.92
BRO1YPL084W SLU7Q02775 382 aaKnown RBP3.03□□□□□ -1.92
BRO1YPL084W GPR1Q12361 961 aa3.03□□□□□ -1.92
BRO1YPL084W KAR4P25583 335 aa3.03□□□□□ -1.92
BRO1YPL084W YBR071WP38243 211 aa3.03□□□□□ -1.92
BRO1YPL084W CCT5P40413 562 aaKnown RBP3.03□□□□□ -1.92
BRO1YPL084W ECM9Q02202 377 aa3.03□□□□□ -1.92
BRO1YPL084W PRE10P21242 288 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms