RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C TY1B-ER2Q03619 1755 aa2.97□□□□□ -1.93
DNL4YOR005C TY1B-MR1Q04214 1755 aa2.97□□□□□ -1.93
DNL4YOR005C TY1B-MR2Q04670 1755 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C TY1B-LR1Q12088 1755 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C TY1B-NL1Q12112 1755 aa2.97□□□□□ -1.93
DNL4YOR005C TY1B-GR1Q12141 1755 aa2.97□□□□□ -1.93
DNL4YOR005C TY1B-BLQ12490 1755 aa2.97□□□□□ -1.93
DNL4YOR005C OPY1P38271 328 aa2.97□□□□□ -1.93
DNL4YOR005C TSL1P38427 1098 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C HXT6P39003 570 aaKnown RBP2.97□□□□□ -1.93
DNL4YOR005C HXT7P39004 570 aa2.97□□□□□ -1.93
DNL4YOR005C YIR014WP40570 242 aa2.97□□□□□ -1.93
DNL4YOR005C HXT16P47185 567 aa2.97□□□□□ -1.93
DNL4YOR005C YGR153WP48238 217 aa2.97□□□□□ -1.93
DNL4YOR005C UBA2P52488 636 aa2.97□□□□□ -1.93
DNL4YOR005C TAN1P53072 289 aaPredicted RBP2.97□□□□□ -1.93
DNL4YOR005C PDS5Q04264 1277 aa2.97□□□□□ -1.93
DNL4YOR005C YDR514CQ04408 483 aa2.97□□□□□ -1.93
DNL4YOR005C SPO21Q12411 609 aa2.97□□□□□ -1.93
DNL4YOR005C ENA1P13587 1091 aa2.96□□□□□ -1.94
DNL4YOR005C PFK1P16861 987 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C PER1P25625 357 aa2.96□□□□□ -1.94
DNL4YOR005C KIP1P28742 1111 aa2.96□□□□□ -1.94
DNL4YOR005C IMP2'P32351 346 aa2.96□□□□□ -1.94
DNL4YOR005C MNT3P40549 630 aa2.96□□□□□ -1.94
DNL4YOR005C SRB7P47822 140 aa2.96□□□□□ -1.94
DNL4YOR005C CNM67P53865 581 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C ENA2Q01896 1091 aa2.96□□□□□ -1.94
DNL4YOR005C TRS130Q03660 1102 aa2.96□□□□□ -1.94
DNL4YOR005C NHX1Q04121 633 aa2.96□□□□□ -1.94
DNL4YOR005C CIA1Q05583 330 aa2.96□□□□□ -1.94
DNL4YOR005C OPY2Q06810 360 aa2.96□□□□□ -1.94
DNL4YOR005C ACM1Q08981 209 aa2.96□□□□□ -1.94
DNL4YOR005C ENA5Q12691 1091 aa2.96□□□□□ -1.94
DNL4YOR005C APM4Q99186 491 aa2.96□□□□□ -1.94
DNL4YOR005C FOB1O13329 566 aa2.96□□□□□ -1.94
DNL4YOR005C INH1P01097 85 aa2.96□□□□□ -1.94
DNL4YOR005C NFS1P25374 497 aa2.96□□□□□ -1.94
DNL4YOR005C PRO1P32264 428 aa2.96□□□□□ -1.94
DNL4YOR005C TOA1P32773 286 aa2.96□□□□□ -1.94
DNL4YOR005C YKR078WP36158 585 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C JNM1P36224 373 aa2.96□□□□□ -1.94
DNL4YOR005C PGM2P37012 569 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C GYP7P48365 746 aa2.96□□□□□ -1.94
DNL4YOR005C YKE2P52553 114 aa2.96□□□□□ -1.94
DNL4YOR005C YGR045CP53229 120 aa2.96□□□□□ -1.94
DNL4YOR005C YPL062WQ02781 134 aa2.96□□□□□ -1.94
DNL4YOR005C RSA3Q05942 220 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C NEW1Q08972 1196 aaKnown RBP2.96□□□□□ -1.94
DNL4YOR005C HFI1Q12060 488 aa2.96□□□□□ -1.94
DNL4YOR005C YLL058WQ12198 575 aa2.96□□□□□ -1.94
DNL4YOR005C PDR12Q02785 1511 aa2.95□□□□□ -1.94
DNL4YOR005C CDC31P06704 161 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C RPS21AP0C0V8 87 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C PHO81P17442 1178 aa2.95□□□□□ -1.94
DNL4YOR005C SER1P33330 395 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C TDA3P38758 523 aa2.95□□□□□ -1.94
DNL4YOR005C RPN3P40016 523 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C NDE1P40215 560 aa2.95□□□□□ -1.94
DNL4YOR005C CAF120P53836 1060 aa2.95□□□□□ -1.94
DNL4YOR005C NAM8Q00539 523 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C CEG1Q01159 459 aaPredicted RBP2.95□□□□□ -1.94
DNL4YOR005C VPS30Q02948 557 aa2.95□□□□□ -1.94
DNL4YOR005C NBA1Q08229 501 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C YDR056CQ12025 205 aa2.95□□□□□ -1.94
DNL4YOR005C YDL176WQ12027 708 aa2.95□□□□□ -1.94
DNL4YOR005C MED1Q12321 566 aa2.95□□□□□ -1.94
DNL4YOR005C YRF1-2P40105 1681 aa2.95□□□□□ -1.94
DNL4YOR005C TRM3Q07527 1436 aa2.95□□□□□ -1.94
DNL4YOR005C MSM1P22438 575 aa2.95□□□□□ -1.94
DNL4YOR005C YKU70P32807 602 aa2.95□□□□□ -1.94
DNL4YOR005C APL2P36000 726 aaPredicted RBP2.95□□□□□ -1.94
DNL4YOR005C ESL1P40456 1118 aa2.95□□□□□ -1.94
DNL4YOR005C ERR3P42222 437 aa2.95□□□□□ -1.94
DNL4YOR005C YFR016CP43597 1233 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C NIT3P49954 291 aa2.95□□□□□ -1.94
DNL4YOR005C SOK2P53438 785 aaPredicted RBP2.95□□□□□ -1.94
DNL4YOR005C TY1A-DR2Q03964 440 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C ECM38Q05902 660 aaPredicted RBP2.95□□□□□ -1.94
DNL4YOR005C ALG6Q12001 544 aaKnown RBP2.95□□□□□ -1.94
DNL4YOR005C YPR027CQ12079 277 aa2.95□□□□□ -1.94
DNL4YOR005C YOL114CQ12322 202 aa2.95□□□□□ -1.94
DNL4YOR005C CHS3P29465 1165 aa2.94□□□□□ -1.94
DNL4YOR005C BEM3P32873 1128 aa2.94□□□□□ -1.94
DNL4YOR005C MAL31P38156 614 aa2.94□□□□□ -1.94
DNL4YOR005C RPN10P38886 268 aaKnown RBP2.94□□□□□ -1.94
DNL4YOR005C IML2P47031 731 aa2.94□□□□□ -1.94
DNL4YOR005C ENV11P53246 860 aa2.94□□□□□ -1.94
DNL4YOR005C UBP2Q01476 1272 aa2.94□□□□□ -1.94
DNL4YOR005C TSR2Q06672 205 aaKnown RBP2.94□□□□□ -1.94
DNL4YOR005C AVO1Q08236 1176 aa2.94□□□□□ -1.94
DNL4YOR005C CLF1Q12309 687 aaPredicted RBP2.94□□□□□ -1.94
DNL4YOR005C SNU66Q12420 587 aaPredicted RBP2.94□□□□□ -1.94
DNL4YOR005C RPO21P04050 1733 aaKnown RBP2.94□□□□□ -1.94
DNL4YOR005C HOP1P20050 605 aa2.94□□□□□ -1.94
DNL4YOR005C PET309P32522 965 aaPredicted RBP2.94□□□□□ -1.94
DNL4YOR005C OAF3P36023 863 aa2.94□□□□□ -1.94
DNL4YOR005C HSL7P38274 827 aa2.94□□□□□ -1.94
DNL4YOR005C OSH7P38755 437 aa2.94□□□□□ -1.94
DNL4YOR005C GPB2P39717 880 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms