RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W PRP22P24384 1145 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W BMH1P29311 267 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W KNS1P32350 737 aaPredicted RBP6.78□□□□□ -1.32
CAF40YNL288W ELM1P32801 640 aa6.78□□□□□ -1.32
CAF40YNL288W MDJ1P35191 511 aa6.78□□□□□ -1.32
CAF40YNL288W AFG3P39925 761 aa6.78□□□□□ -1.32
CAF40YNL288W YEL025CP39991 1188 aa6.78□□□□□ -1.32
CAF40YNL288W FIS1P40515 155 aa6.78□□□□□ -1.32
CAF40YNL288W THI6P41835 540 aa6.78□□□□□ -1.32
CAF40YNL288W SKP2P42843 763 aa6.78□□□□□ -1.32
CAF40YNL288W RPS7BP48164 190 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W SCS3P53012 380 aa6.78□□□□□ -1.32
CAF40YNL288W CBK1P53894 756 aa6.78□□□□□ -1.32
CAF40YNL288W DAK1P54838 584 aaKnown RBP6.78□□□□□ -1.32
CAF40YNL288W RTP1Q12751 981 aa6.78□□□□□ -1.32
CAF40YNL288W AIM44Q99299 758 aa6.78□□□□□ -1.32
CAF40YNL288W ECM29P38737 1868 aa6.78□□□□□ -1.32
CAF40YNL288W FOB1O13329 566 aa6.77□□□□□ -1.33
CAF40YNL288W MAS2P11914 482 aa6.77□□□□□ -1.33
CAF40YNL288W FRS2P15625 503 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W PDC5P16467 563 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W RME1P32338 300 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W UIP5P36137 443 aa6.77□□□□□ -1.33
CAF40YNL288W PAM1P37304 830 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W FLR1P38124 548 aa6.77□□□□□ -1.33
CAF40YNL288W CCT5P40413 562 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W FYV10P40492 516 aa6.77□□□□□ -1.33
CAF40YNL288W UBA2P52488 636 aa6.77□□□□□ -1.33
CAF40YNL288W PGA2P53903 129 aa6.77□□□□□ -1.33
CAF40YNL288W COG8Q04632 607 aa6.77□□□□□ -1.33
CAF40YNL288W ECM30Q06673 1274 aa6.77□□□□□ -1.33
CAF40YNL288W ETT1Q08421 412 aaKnown RBP6.77□□□□□ -1.33
CAF40YNL288W TCP1P12612 559 aaKnown RBP6.76□□□□□ -1.33
CAF40YNL288W IME2P32581 645 aa6.76□□□□□ -1.33
CAF40YNL288W YKT6P36015 200 aaKnown RBP6.76□□□□□ -1.33
CAF40YNL288W GIP1P38229 639 aa6.76□□□□□ -1.33
CAF40YNL288W SIP3P38717 1229 aa6.76□□□□□ -1.33
CAF40YNL288W NUP82P40368 713 aa6.76□□□□□ -1.33
CAF40YNL288W VTC2P43585 828 aa6.76□□□□□ -1.33
CAF40YNL288W DIP5P53388 608 aa6.76□□□□□ -1.33
CAF40YNL288W YNR014WP53719 212 aa6.76□□□□□ -1.33
CAF40YNL288W YNR040WP53736 256 aa6.76□□□□□ -1.33
CAF40YNL288W FMP30Q02883 468 aa6.76□□□□□ -1.33
CAF40YNL288W MSC2Q03455 724 aa6.76□□□□□ -1.33
CAF40YNL288W ADY4Q05955 493 aa6.76□□□□□ -1.33
CAF40YNL288W GPI13Q07830 1017 aa6.76□□□□□ -1.33
CAF40YNL288W SMC5Q08204 1093 aa6.76□□□□□ -1.33
CAF40YNL288W DDP1Q99321 188 aaKnown RBP6.76□□□□□ -1.33
CAF40YNL288W YEL076C-AP0CX16 216 aa6.75□□□□□ -1.33
CAF40YNL288W YLR464WP0CX17 216 aa6.75□□□□□ -1.33
CAF40YNL288W KIN82P25341 720 aa6.75□□□□□ -1.33
CAF40YNL288W YEL076CP39971 216 aa6.75□□□□□ -1.33
CAF40YNL288W RSM25P40496 264 aa6.75□□□□□ -1.33
CAF40YNL288W CIR1P42940 261 aa6.75□□□□□ -1.33
CAF40YNL288W YFL040WP43562 540 aa6.75□□□□□ -1.33
CAF40YNL288W PSP2P50109 593 aaKnown RBP6.75□□□□□ -1.33
CAF40YNL288W SEC5P89102 971 aa6.75□□□□□ -1.33
CAF40YNL288W PUS1Q12211 544 aaKnown RBP6.75□□□□□ -1.33
CAF40YNL288W HEM1P09950 548 aaPredicted RBP6.74□□□□□ -1.33
CAF40YNL288W CDC48P25694 835 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W MSP1P28737 362 aa6.74□□□□□ -1.33
CAF40YNL288W HIR1P32479 840 aa6.74□□□□□ -1.33
CAF40YNL288W SMY2P32909 740 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W PET10P36139 283 aa6.74□□□□□ -1.33
CAF40YNL288W SNF7P39929 240 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W RPN3P40016 523 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W FIR1P40020 876 aa6.74□□□□□ -1.33
CAF40YNL288W PRK1P40494 810 aa6.74□□□□□ -1.33
CAF40YNL288W DJP1P40564 432 aa6.74□□□□□ -1.33
CAF40YNL288W SBE2P42223 864 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W YFL066CP43538 392 aa6.74□□□□□ -1.33
CAF40YNL288W YPT11P48559 417 aa6.74□□□□□ -1.33
CAF40YNL288W EAF7P53911 425 aaKnown RBP6.74□□□□□ -1.33
CAF40YNL288W ATG11Q12527 1178 aa6.74□□□□□ -1.33
CAF40YNL288W PFK1P16861 987 aaKnown RBP6.73□□□□□ -1.33
CAF40YNL288W ISY1P21374 235 aaPredicted RBP6.73□□□□□ -1.33
CAF40YNL288W UBC1P21734 215 aaKnown RBP6.73□□□□□ -1.33
CAF40YNL288W EFT1P32324 842 aaKnown RBP6.73□□□□□ -1.33
CAF40YNL288W NAB2P32505 525 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
CAF40YNL288W WHI3P34761 661 aaKnown RBP6.73□□□□□ -1.33
CAF40YNL288W ATG19P35193 415 aa6.73□□□□□ -1.33
CAF40YNL288W PIH1P38768 344 aa6.73□□□□□ -1.33
CAF40YNL288W HXT8P40886 569 aa6.73□□□□□ -1.33
CAF40YNL288W NCS2P53923 493 aaPredicted RBP6.73□□□□□ -1.33
CAF40YNL288W ROD1Q02805 837 aa6.73□□□□□ -1.33
CAF40YNL288W YPL034WQ03083 165 aa6.73□□□□□ -1.33
CAF40YNL288W VPS72Q03388 795 aa6.73□□□□□ -1.33
CAF40YNL288W LSO1Q3E827 93 aa6.73□□□□□ -1.33
CAF40YNL288W MSN1P22148 382 aa6.72□□□□□ -1.33
CAF40YNL288W RPC53P25441 422 aa6.72□□□□□ -1.33
CAF40YNL288W DUR3P33413 735 aa6.72□□□□□ -1.33
CAF40YNL288W KTR2P33550 425 aa6.72□□□□□ -1.33
CAF40YNL288W MAC1P35192 417 aa6.72□□□□□ -1.33
CAF40YNL288W BOL3P39724 118 aa6.72□□□□□ -1.33
CAF40YNL288W YER130CP39959 443 aa6.72□□□□□ -1.33
CAF40YNL288W EAF5P39995 279 aa6.72□□□□□ -1.33
CAF40YNL288W SUT1P53032 299 aaKnown RBP6.72□□□□□ -1.33
CAF40YNL288W GUP1P53154 560 aa6.72□□□□□ -1.33
CAF40YNL288W COQ9Q05779 260 aa6.72□□□□□ -1.33
CAF40YNL288W CUR1Q06469 252 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms