RNA–Protein interactions for RNA: YNL236W

SIN4, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SIN4, Length 2,925 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIN4	YNL236W	LYS5	P50113	272 aa		4.11	□□□□□ -1.75
SIN4	YNL236W	BLS1	Q06071	122 aa		4.11	□□□□□ -1.75
SIN4	YNL236W	RPN7	Q06103	429 aa	Known RBP	4.11	□□□□□ -1.75
SIN4	YNL236W	YDR056C	Q12025	205 aa		4.11	□□□□□ -1.75
SIN4	YNL236W	NUR1	Q12066	484 aa		4.11	□□□□□ -1.75
SIN4	YNL236W	TY4B-P	A0A0B7P3V8	1104 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	MSM1	P22438	575 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	GPT2	P36148	743 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	FAT1	P38225	669 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	BRE2	P43132	505 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	HXT16	P47185	567 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	ASK10	P48361	1146 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	ENV11	P53246	860 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	TSR2	Q06672	205 aa	Known RBP	4.1	□□□□□ -1.75
SIN4	YNL236W	HFI1	Q12060	488 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	YLL058W	Q12198	575 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	SLP1	Q12232	587 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	TY4A-H	Q6Q5P6	413 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	COQ4	O13525	335 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	PRC1	P00729	532 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	CNM67	P53865	581 aa	Known RBP	4.1	□□□□□ -1.75
SIN4	YNL236W	TEP1	P53916	434 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	MOT3	P54785	490 aa	Known RBP	4.1	□□□□□ -1.75
SIN4	YNL236W	CEG1	Q01159	459 aa	Predicted RBP	4.1	□□□□□ -1.75
SIN4	YNL236W	TY1A-MR1	Q04215	440 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	SYT1	Q06836	1226 aa		4.1	□□□□□ -1.75
SIN4	YNL236W	FOB1	O13329	566 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	URA1	P28272	314 aa	Predicted RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	CYS3	P31373	394 aa	Known RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	SET5	P38890	526 aa	Known RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	HOL1	P53389	586 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	OMS1	Q06668	471 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	OSW2	Q12202	724 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	HSC82	P15108	705 aa	Known RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	PDC5	P16467	563 aa	Known RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	ATP12	P22135	325 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	NFU1	P32860	256 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	APL2	P36000	726 aa	Predicted RBP	4.09	□□□□□ -1.75
SIN4	YNL236W	YIL092W	P40497	633 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	YKE2	P52553	114 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	MTC3	P53077	123 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	TRS130	Q03660	1102 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	YOR022C	Q12204	715 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	YBR182C-A	Q8TGU6	64 aa		4.09	□□□□□ -1.75
SIN4	YNL236W	NOT3	P06102	836 aa	Known RBP	4.08	□□□□□ -1.76
SIN4	YNL236W	SNF5	P18480	905 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	FUN30	P31380	1131 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	MNN4	P36044	1178 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	PSY4	P38193	441 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	SAW1	P39735	261 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	PUS7	Q08647	676 aa	Known RBP	4.08	□□□□□ -1.76
SIN4	YNL236W	RTP1	Q12751	981 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	YKR075C	P36155	307 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	MEP3	P53390	489 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	RSB1	Q08417	382 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	YPL277C	Q08989	487 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	CWC2	Q12046	339 aa	Predicted RBP	4.08	□□□□□ -1.76
SIN4	YNL236W	NSI1	Q12457	570 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	BLI1	P35727	113 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	POA1	P38218	177 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	PUS2	P53167	370 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	DSE4	P53753	1117 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	OPY2	Q06810	360 aa		4.08	□□□□□ -1.76
SIN4	YNL236W	RCL1	Q08096	367 aa	Predicted RBP	4.08	□□□□□ -1.76
SIN4	YNL236W	YOR059C	Q08448	450 aa	Known RBP	4.08	□□□□□ -1.76
SIN4	YNL236W	RER1	P25560	188 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	NCE103	P53615	221 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SIN4	YNL236W	PHO3	P24031	467 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	PET309	P32522	965 aa	Predicted RBP	4.07	□□□□□ -1.76
SIN4	YNL236W	CCZ1	P38273	704 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	EAF5	P39995	279 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	MED1	Q12321	566 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	APM4	Q99186	491 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	YLR149C	Q99296	730 aa		4.07	□□□□□ -1.76
SIN4	YNL236W	GPM1	P00950	247 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	KNS1	P32350	737 aa	Predicted RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	MAL31	P38156	614 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	PPE1	P38796	400 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	HDA1	P53973	706 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	SDH1	Q00711	640 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SIN4	YNL236W	MCH5	Q08777	521 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	DCS2	Q12123	353 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	CLF1	Q12309	687 aa	Predicted RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	ENT1	Q12518	454 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	CDC31	P06704	161 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	RPS4A	P0CX35	261 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	RPS4B	P0CX36	261 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	RPD3	P32561	433 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	TFC3	P34111	1160 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	FLR1	P38124	548 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	APM3	P38153	483 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	PIK1	P39104	1066 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	SBE2	P42223	864 aa	Known RBP	4.06	□□□□□ -1.76
SIN4	YNL236W	BNA1	P47096	177 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	HFM1	P51979	1187 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	GCR2	Q01722	534 aa		4.06	□□□□□ -1.76
SIN4	YNL236W	CIA1	Q05583	330 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 98.7 ms