RNA–Protein interactions for RNA: YNL082W

PMS1, Transcript of ATP-binding protein required for mismatch repair, yeast

Gene PMS1, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMS1	YNL082W	ARI1	P53111	347 aa	Known RBP	4.92	□□□□□ -1.62
PMS1	YNL082W	CYS3	P31373	394 aa	Known RBP	4.92	□□□□□ -1.62
PMS1	YNL082W	YKR018C	P36114	725 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	HSL7	P38274	827 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	MSC2	Q03455	724 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	MTC5	Q03897	1148 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	PHM6	Q05637	104 aa		4.92	□□□□□ -1.62
PMS1	YNL082W	COX11	P19516	300 aa	Known RBP	4.91	□□□□□ -1.62
PMS1	YNL082W	SSZ1	P38788	538 aa	Known RBP	4.91	□□□□□ -1.62
PMS1	YNL082W	NOG2	P53742	486 aa	Known RBP	4.91	□□□□□ -1.62
PMS1	YNL082W	VPS72	Q03388	795 aa		4.91	□□□□□ -1.62
PMS1	YNL082W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
PMS1	YNL082W	SPT6	P23615	1451 aa	Known RBP	4.91	□□□□□ -1.62
PMS1	YNL082W	COQ4	O13525	335 aa		4.91	□□□□□ -1.62
PMS1	YNL082W	MCX1	P38323	520 aa	Predicted RBP	4.91	□□□□□ -1.62
PMS1	YNL082W	RMP1	Q12530	201 aa		4.91	□□□□□ -1.62
PMS1	YNL082W	GAR1	P28007	205 aa	Known RBP	4.9	□□□□□ -1.62
PMS1	YNL082W	PTP2	P29461	750 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	MDL2	P33311	773 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	DID4	P36108	232 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	AKR1	P39010	764 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	MMM1	P41800	426 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	BNA2	P47125	453 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	YPR196W	Q06595	470 aa		4.9	□□□□□ -1.62
PMS1	YNL082W	BRE1	Q07457	700 aa	Known RBP	4.9	□□□□□ -1.62
PMS1	YNL082W	RRP6	Q12149	733 aa	Known RBP	4.9	□□□□□ -1.62
PMS1	YNL082W	TRZ1	P36159	838 aa	Predicted RBP	4.9	□□□□□ -1.63
PMS1	YNL082W	TDA3	P38758	523 aa		4.9	□□□□□ -1.63
PMS1	YNL082W	QRI7	P43122	407 aa		4.9	□□□□□ -1.63
PMS1	YNL082W	SIZ1	Q04195	904 aa		4.9	□□□□□ -1.63
PMS1	YNL082W	OSW2	Q12202	724 aa		4.9	□□□□□ -1.63
PMS1	YNL082W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
PMS1	YNL082W	GCD1	P09032	578 aa	Predicted RBP	4.89	□□□□□ -1.63
PMS1	YNL082W	CCZ1	P38273	704 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	ERR3	P42222	437 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	ZIP2	P53061	704 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	NPY1	P53164	384 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	SKY1	Q03656	742 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	CRR1	Q05790	422 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	SWI6	P09959	803 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	PRP4	P20053	465 aa	Known RBP	4.89	□□□□□ -1.63
PMS1	YNL082W	DBF20	P32328	564 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	SRP101	P32916	621 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	VID27	P40157	782 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	HIS6	P40545	261 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	YNR014W	P53719	212 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	CEF1	Q03654	590 aa	Predicted RBP	4.89	□□□□□ -1.63
PMS1	YNL082W	WHI4	Q07655	649 aa	Known RBP	4.89	□□□□□ -1.63
PMS1	YNL082W	LPX1	Q12405	387 aa	Known RBP	4.89	□□□□□ -1.63
PMS1	YNL082W	NKP1	Q12493	238 aa		4.89	□□□□□ -1.63
PMS1	YNL082W	GLN4	P13188	809 aa	Known RBP	4.88	□□□□□ -1.63
PMS1	YNL082W	FLR1	P38124	548 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	BEM4	P39011	633 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	EAF5	P39995	279 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	YJR039W	P47107	1121 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	RAI1	P53063	387 aa	Known RBP	4.88	□□□□□ -1.63
PMS1	YNL082W	MLC2	Q06580	163 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	MCA1	Q08601	432 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	TRE1	Q08919	783 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	RSC6	P25632	483 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	RPN7	Q06103	429 aa	Known RBP	4.88	□□□□□ -1.63
PMS1	YNL082W	SGS1	P35187	1447 aa		4.88	□□□□□ -1.63
PMS1	YNL082W	DIF1	O13577	133 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	ENA1	P13587	1091 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	TYE7	P33122	291 aa	Predicted RBP	4.87	□□□□□ -1.63
PMS1	YNL082W	RPN10	P38886	268 aa	Known RBP	4.87	□□□□□ -1.63
PMS1	YNL082W	SET5	P38890	526 aa	Known RBP	4.87	□□□□□ -1.63
PMS1	YNL082W	DUS1	P53759	423 aa	Known RBP	4.87	□□□□□ -1.63
PMS1	YNL082W	ENA2	Q01896	1091 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
PMS1	YNL082W	ENA5	Q12691	1091 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	RPC82	P32349	654 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	CIT3	P43635	486 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	YGR035C	P53222	116 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	RCM1	P53972	490 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	YHM2	Q04013	314 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	OMS1	Q06668	471 aa		4.87	□□□□□ -1.63
PMS1	YNL082W	SEC65	P29478	273 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	AIM26	P32858	118 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	AKL1	P38080	1108 aa	Known RBP	4.86	□□□□□ -1.63
PMS1	YNL082W	PTC7	P38797	343 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	PCL10	P53124	433 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	RCR2	Q03446	210 aa	Known RBP	4.86	□□□□□ -1.63
PMS1	YNL082W	YPS7	Q06325	596 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	YPR027C	Q12079	277 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	AI1	P03875	834 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	IME1	P21190	360 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	RFA1	P22336	621 aa	Known RBP	4.86	□□□□□ -1.63
PMS1	YNL082W	STE14	P32584	239 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	RFC5	P38251	354 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	CNM67	P53865	581 aa	Known RBP	4.86	□□□□□ -1.63
PMS1	YNL082W	SSY1	Q03770	852 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	PEX15	Q08215	383 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	THI72	Q08579	599 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	YOL114C	Q12322	202 aa		4.86	□□□□□ -1.63
PMS1	YNL082W	YKU70	P32807	602 aa		4.85	□□□□□ -1.63
PMS1	YNL082W	MIP6	P38760	659 aa	Known RBP	4.85	□□□□□ -1.63
PMS1	YNL082W	GTS1	P40956	396 aa		4.85	□□□□□ -1.63
PMS1	YNL082W	IRC5	P43610	853 aa		4.85	□□□□□ -1.63
PMS1	YNL082W	YGR012W	P53206	393 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms