RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C TCO89Q08921 799 aa5.27□□□□□ -1.57
NUP116YMR047C NBL1Q3E7Y6 73 aa5.27□□□□□ -1.57
NUP116YMR047C ILV1P00927 576 aaKnown RBP5.26□□□□□ -1.57
NUP116YMR047C PCT1P13259 424 aa5.26□□□□□ -1.57
NUP116YMR047C URK1P27515 501 aa5.26□□□□□ -1.57
NUP116YMR047C EAF5P39995 279 aa5.26□□□□□ -1.57
NUP116YMR047C CUL3P53202 744 aa5.26□□□□□ -1.57
NUP116YMR047C YNL134CP53912 376 aaKnown RBP5.26□□□□□ -1.57
NUP116YMR047C GSY1P23337 708 aa5.26□□□□□ -1.57
NUP116YMR047C ARL1P38116 183 aaKnown RBP5.26□□□□□ -1.57
NUP116YMR047C OCA5P38738 679 aa5.26□□□□□ -1.57
NUP116YMR047C YHR054CP38780 354 aa5.26□□□□□ -1.57
NUP116YMR047C CIN4P39110 191 aa5.26□□□□□ -1.57
NUP116YMR047C MPH1P40562 993 aa5.26□□□□□ -1.57
NUP116YMR047C LAM5P43560 674 aa5.26□□□□□ -1.57
NUP116YMR047C MNP1P53163 194 aaPredicted RBP5.26□□□□□ -1.57
NUP116YMR047C RTT102P53330 157 aa5.26□□□□□ -1.57
NUP116YMR047C DON1Q05610 365 aa5.26□□□□□ -1.57
NUP116YMR047C YDL073WQ07454 984 aa5.26□□□□□ -1.57
NUP116YMR047C RAD3P06839 778 aa5.26□□□□□ -1.57
NUP116YMR047C YEL076C-AP0CX16 216 aa5.26□□□□□ -1.57
NUP116YMR047C YLR464WP0CX17 216 aa5.26□□□□□ -1.57
NUP116YMR047C FAR1P21268 830 aa5.26□□□□□ -1.57
NUP116YMR047C SCJ1P25303 377 aa5.26□□□□□ -1.57
NUP116YMR047C HIR1P32479 840 aa5.26□□□□□ -1.57
NUP116YMR047C RAD54P32863 898 aa5.26□□□□□ -1.57
NUP116YMR047C YEL076CP39971 216 aa5.26□□□□□ -1.57
NUP116YMR047C IAH1P41734 238 aa5.26□□□□□ -1.57
NUP116YMR047C YRB1P41920 201 aaKnown RBP5.26□□□□□ -1.57
NUP116YMR047C ALT2P52892 507 aa5.26□□□□□ -1.57
NUP116YMR047C RNT1Q02555 471 aa5.26□□□□□ -1.57
NUP116YMR047C RUD3Q12234 484 aaKnown RBP5.26□□□□□ -1.57
NUP116YMR047C PHO8P11491 566 aa5.25□□□□□ -1.57
NUP116YMR047C ISY1P21374 235 aaPredicted RBP5.25□□□□□ -1.57
NUP116YMR047C SIP3P38717 1229 aa5.25□□□□□ -1.57
NUP116YMR047C PMC1P38929 1173 aaPredicted RBP5.25□□□□□ -1.57
NUP116YMR047C NPP2P39997 493 aa5.25□□□□□ -1.57
NUP116YMR047C NOP13P53883 403 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
NUP116YMR047C TRS120Q04183 1289 aa5.25□□□□□ -1.57
NUP116YMR047C PIG1Q06216 648 aa5.25□□□□□ -1.57
NUP116YMR047C GPI13Q07830 1017 aa5.25□□□□□ -1.57
NUP116YMR047C PTH2P34222 208 aa5.25□□□□□ -1.57
NUP116YMR047C YBR284WP38150 797 aa5.25□□□□□ -1.57
NUP116YMR047C YER186CP40101 306 aa5.25□□□□□ -1.57
NUP116YMR047C HUL4P40985 892 aa5.25□□□□□ -1.57
NUP116YMR047C SUM1P46676 1062 aa5.25□□□□□ -1.57
NUP116YMR047C ART5P53244 586 aaKnown RBP5.25□□□□□ -1.57
NUP116YMR047C BTN2P53286 410 aa5.25□□□□□ -1.57
NUP116YMR047C ELA1P53861 379 aaPredicted RBP5.25□□□□□ -1.57
NUP116YMR047C AIM33Q04516 312 aa5.25□□□□□ -1.57
NUP116YMR047C OXR1Q08952 273 aa5.25□□□□□ -1.57
NUP116YMR047C OSW2Q12202 724 aa5.25□□□□□ -1.57
NUP116YMR047C DBP10Q12389 995 aaKnown RBP5.25□□□□□ -1.57
NUP116YMR047C MET4P32389 672 aa5.25□□□□□ -1.57
NUP116YMR047C ARC19P33204 171 aaKnown RBP5.25□□□□□ -1.57
NUP116YMR047C PEX5P35056 612 aa5.25□□□□□ -1.57
NUP116YMR047C RFS1P38234 210 aaKnown RBP5.25□□□□□ -1.57
NUP116YMR047C ERC1P38767 581 aa5.25□□□□□ -1.57
NUP116YMR047C FMP10P40098 244 aa5.25□□□□□ -1.57
NUP116YMR047C FIG4P42837 879 aa5.25□□□□□ -1.57
NUP116YMR047C EPL1P43572 832 aa5.25□□□□□ -1.57
NUP116YMR047C DAS1P47005 663 aa5.25□□□□□ -1.57
NUP116YMR047C CTF18P49956 741 aa5.25□□□□□ -1.57
NUP116YMR047C YGR273CP53329 174 aa5.25□□□□□ -1.57
NUP116YMR047C DSL1P53847 754 aa5.25□□□□□ -1.57
NUP116YMR047C CBK1P53894 756 aa5.25□□□□□ -1.57
NUP116YMR047C YNL146WP53906 100 aa5.25□□□□□ -1.57
NUP116YMR047C SGT2Q12118 346 aaKnown RBP5.25□□□□□ -1.57
NUP116YMR047C BRR1Q99177 341 aaPredicted RBP5.25□□□□□ -1.57
NUP116YMR047C MAK16P10962 306 aaPredicted RBP5.24□□□□□ -1.57
NUP116YMR047C MSP1P28737 362 aa5.24□□□□□ -1.57
NUP116YMR047C DRE2P36152 348 aa5.24□□□□□ -1.57
NUP116YMR047C MMS4P38257 691 aa5.24□□□□□ -1.57
NUP116YMR047C YNL115CP53925 644 aa5.24□□□□□ -1.57
NUP116YMR047C ADA2Q02336 434 aa5.24□□□□□ -1.57
NUP116YMR047C DNL4Q08387 944 aaPredicted RBP5.24□□□□□ -1.57
NUP116YMR047C GIS3Q12418 502 aa5.24□□□□□ -1.57
NUP116YMR047C GGA2P38817 585 aaKnown RBP5.24□□□□□ -1.57
NUP116YMR047C GIS4Q04233 774 aa5.24□□□□□ -1.57
NUP116YMR047C COX4P04037 155 aa5.23□□□□□ -1.57
NUP116YMR047C VPS1P21576 704 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C RAD16P31244 790 aa5.23□□□□□ -1.57
NUP116YMR047C NKP1Q12493 238 aa5.23□□□□□ -1.57
NUP116YMR047C SEC39Q12745 709 aa5.23□□□□□ -1.57
NUP116YMR047C CPA2P03965 1118 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C HIP1P06775 603 aa5.23□□□□□ -1.57
NUP116YMR047C HMG2P12684 1045 aa5.23□□□□□ -1.57
NUP116YMR047C NAT1P12945 854 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C DBP5P20449 482 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C URA1P28272 314 aaPredicted RBP5.23□□□□□ -1.57
NUP116YMR047C ATG19P35193 415 aa5.23□□□□□ -1.57
NUP116YMR047C BDH2P39713 417 aa5.23□□□□□ -1.57
NUP116YMR047C MRI1Q06489 411 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C APC5Q08683 685 aa5.23□□□□□ -1.57
NUP116YMR047C MNL2Q12205 849 aa5.23□□□□□ -1.57
NUP116YMR047C HSP42Q12329 375 aa5.23□□□□□ -1.57
NUP116YMR047C TRS33Q99394 268 aa5.23□□□□□ -1.57
NUP116YMR047C SUP45P12385 437 aaKnown RBP5.23□□□□□ -1.57
NUP116YMR047C TRM2P33753 639 aa5.23□□□□□ -1.57
NUP116YMR047C MAL33P38157 468 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms