RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C IWR1Q07532 353 aaPredicted RBP9.84□□□□□ -0.83
SEC61YLR378C ICL2Q12031 575 aa9.84□□□□□ -0.83
SEC61YLR378C CDC33P07260 213 aaKnown RBP9.83□□□□□ -0.84
SEC61YLR378C SNA3P14359 133 aa9.83□□□□□ -0.84
SEC61YLR378C FLR1P38124 548 aa9.83□□□□□ -0.84
SEC61YLR378C PRP31P49704 494 aaPredicted RBP9.83□□□□□ -0.84
SEC61YLR378C TPO2P53283 614 aa9.83□□□□□ -0.84
SEC61YLR378C SYH1Q02875 849 aaKnown RBP9.83□□□□□ -0.84
SEC61YLR378C TRS130Q03660 1102 aa9.83□□□□□ -0.84
SEC61YLR378C YMR018WQ04364 514 aa9.83□□□□□ -0.84
SEC61YLR378C WHI2P12611 486 aa9.82□□□□□ -0.84
SEC61YLR378C SEC21P32074 935 aaKnown RBP9.82□□□□□ -0.84
SEC61YLR378C CBF2P32504 956 aa9.82□□□□□ -0.84
SEC61YLR378C MMS4P38257 691 aa9.82□□□□□ -0.84
SEC61YLR378C KSP1P38691 1029 aaKnown RBP9.82□□□□□ -0.84
SEC61YLR378C SMF1P38925 575 aa9.82□□□□□ -0.84
SEC61YLR378C TCB2P48231 1178 aa9.82□□□□□ -0.84
SEC61YLR378C KAP114P53067 1004 aa9.82□□□□□ -0.84
SEC61YLR378C BTN2P53286 410 aa9.82□□□□□ -0.84
SEC61YLR378C MSC2Q03455 724 aa9.82□□□□□ -0.84
SEC61YLR378C STE20Q03497 939 aaKnown RBP9.82□□□□□ -0.84
SEC61YLR378C YMR114CQ04471 368 aaKnown RBP9.82□□□□□ -0.84
SEC61YLR378C SIL1Q08199 421 aa9.82□□□□□ -0.84
SEC61YLR378C SRF1Q12516 437 aa9.82□□□□□ -0.84
SEC61YLR378C TMT1P32643 299 aa9.82□□□□□ -0.84
SEC61YLR378C BLI1P35727 113 aa9.82□□□□□ -0.84
SEC61YLR378C YKL050CP35736 922 aa9.82□□□□□ -0.84
SEC61YLR378C EXO5P38289 585 aa9.82□□□□□ -0.84
SEC61YLR378C CCT4P39078 528 aaKnown RBP9.82□□□□□ -0.84
SEC61YLR378C MAD1P40957 749 aa9.82□□□□□ -0.84
SEC61YLR378C CLA4P48562 842 aa9.82□□□□□ -0.84
SEC61YLR378C SPT2P06843 333 aaPredicted RBP9.81□□□□□ -0.84
SEC61YLR378C DBP1P24784 617 aaKnown RBP9.81□□□□□ -0.84
SEC61YLR378C DAL2P25335 343 aa9.81□□□□□ -0.84
SEC61YLR378C CNS1P33313 385 aa9.81□□□□□ -0.84
SEC61YLR378C LTV1P34078 463 aa9.81□□□□□ -0.84
SEC61YLR378C TRZ1P36159 838 aaPredicted RBP9.81□□□□□ -0.84
SEC61YLR378C MRX3P38172 270 aa9.81□□□□□ -0.84
SEC61YLR378C SPC72P39723 622 aa9.81□□□□□ -0.84
SEC61YLR378C YTA12P40341 825 aa9.81□□□□□ -0.84
SEC61YLR378C CPR7P47103 393 aa9.81□□□□□ -0.84
SEC61YLR378C YJR107WP47145 328 aa9.81□□□□□ -0.84
SEC61YLR378C CWC22P53333 577 aaKnown RBP9.81□□□□□ -0.84
SEC61YLR378C RRB1Q04225 511 aaKnown RBP9.81□□□□□ -0.84
SEC61YLR378C POB3Q04636 552 aaKnown RBP9.81□□□□□ -0.84
SEC61YLR378C SHS1Q07657 551 aa9.81□□□□□ -0.84
SEC61YLR378C SGT2Q12118 346 aaKnown RBP9.81□□□□□ -0.84
SEC61YLR378C ATG11Q12527 1178 aa9.81□□□□□ -0.84
SEC61YLR378C GFA1P14742 717 aaKnown RBP9.8□□□□□ -0.84
SEC61YLR378C RPO26P20435 155 aa9.8□□□□□ -0.84
SEC61YLR378C SPT5P27692 1063 aaKnown RBP9.8□□□□□ -0.84
SEC61YLR378C CSG2P35206 410 aa9.8□□□□□ -0.84
SEC61YLR378C PSF2P40359 213 aa9.8□□□□□ -0.84
SEC61YLR378C SKP2P42843 763 aa9.8□□□□□ -0.84
SEC61YLR378C DAS1P47005 663 aa9.8□□□□□ -0.84
SEC61YLR378C MNP1P53163 194 aaPredicted RBP9.8□□□□□ -0.84
SEC61YLR378C DRN1P53255 507 aaKnown RBP9.8□□□□□ -0.84
SEC61YLR378C DAK1P54838 584 aaKnown RBP9.8□□□□□ -0.84
SEC61YLR378C ATG23Q06671 453 aa9.8□□□□□ -0.84
SEC61YLR378C GIS3Q12418 502 aa9.8□□□□□ -0.84
SEC61YLR378C RTP1Q12751 981 aa9.8□□□□□ -0.84
SEC61YLR378C ERG11P10614 530 aa9.79□□□□□ -0.84
SEC61YLR378C IME1P21190 360 aa9.79□□□□□ -0.84
SEC61YLR378C MSS51P32335 436 aa9.79□□□□□ -0.84
SEC61YLR378C VPS70P47161 811 aa9.79□□□□□ -0.84
SEC61YLR378C ZRT2Q12436 422 aa9.79□□□□□ -0.84
SEC61YLR378C CDC42P19073 191 aa9.78□□□□□ -0.84
SEC61YLR378C COX11P19516 300 aaKnown RBP9.78□□□□□ -0.84
SEC61YLR378C TRM2P33753 639 aa9.78□□□□□ -0.84
SEC61YLR378C SBE2P42223 864 aaKnown RBP9.78□□□□□ -0.84
SEC61YLR378C BRE5P53741 515 aaKnown RBP9.78□□□□□ -0.84
SEC61YLR378C ASP3-2P0CX77 362 aa9.77□□□□□ -0.85
SEC61YLR378C ASP3-3P0CX78 362 aa9.77□□□□□ -0.85
SEC61YLR378C ASP3-4P0CX79 362 aa9.77□□□□□ -0.85
SEC61YLR378C ASP3-1P0CZ17 362 aa9.77□□□□□ -0.85
SEC61YLR378C PAP1P29468 568 aaKnown RBP9.77□□□□□ -0.85
SEC61YLR378C CDC11P32458 415 aa9.77□□□□□ -0.85
SEC61YLR378C KAP123P40069 1113 aaKnown RBP9.77□□□□□ -0.85
SEC61YLR378C RPC17P47076 161 aa9.77□□□□□ -0.85
SEC61YLR378C NCS6P53088 359 aa9.77□□□□□ -0.85
SEC61YLR378C CUS1Q02554 436 aaPredicted RBP9.77□□□□□ -0.85
SEC61YLR378C PPM1Q04081 328 aa9.77□□□□□ -0.85
SEC61YLR378C ABP140Q08641 628 aaKnown RBP9.77□□□□□ -0.85
SEC61YLR378C ZPS1Q12512 249 aa9.77□□□□□ -0.85
SEC61YLR378C AI5_BETAQ9ZZX0 354 aa9.77□□□□□ -0.85
SEC61YLR378C RPS3P05750 240 aaKnown RBP9.76□□□□□ -0.85
SEC61YLR378C RRN6P32786 894 aa9.76□□□□□ -0.85
SEC61YLR378C BCS1P32839 456 aa9.76□□□□□ -0.85
SEC61YLR378C NFU1P32860 256 aa9.76□□□□□ -0.85
SEC61YLR378C RCK2P38623 610 aa9.76□□□□□ -0.85
SEC61YLR378C DYS1P38791 387 aa9.76□□□□□ -0.85
SEC61YLR378C YGR111WP53265 400 aa9.76□□□□□ -0.85
SEC61YLR378C DIG1Q03063 452 aaKnown RBP9.76□□□□□ -0.85
SEC61YLR378C VTI1Q04338 217 aa9.76□□□□□ -0.85
SEC61YLR378C SUT2Q12286 268 aa9.76□□□□□ -0.85
SEC61YLR378C YOR131CQ12486 218 aa9.76□□□□□ -0.85
SEC61YLR378C CDC8P00572 216 aa9.75□□□□□ -0.85
SEC61YLR378C VMA4P22203 233 aaKnown RBP9.75□□□□□ -0.85
SEC61YLR378C RRT12P25381 491 aa9.75□□□□□ -0.85
SEC61YLR378C BUD2P33314 1104 aa9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms