RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	EEB1	Q02891	456 aa		10.56	□□□□□ -0.72
SAM1	YLR180W	KGD2	P19262	463 aa	Predicted RBP	10.55	□□□□□ -0.72
SAM1	YLR180W	DBP5	P20449	482 aa	Known RBP	10.55	□□□□□ -0.72
SAM1	YLR180W	ERC1	P38767	581 aa		10.55	□□□□□ -0.72
SAM1	YLR180W	EIS1	Q05050	843 aa	Known RBP	10.55	□□□□□ -0.72
SAM1	YLR180W	ECM7	Q06200	448 aa		10.55	□□□□□ -0.72
SAM1	YLR180W	OSH2	Q12451	1283 aa		10.55	□□□□□ -0.72
SAM1	YLR180W	MEX67	Q99257	599 aa	Known RBP	10.55	□□□□□ -0.72
SAM1	YLR180W	HIS4	P00815	799 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	RPS14A	P06367	137 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	MCM2	P29469	868 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	RPS14B	P39516	138 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	FAA4	P47912	694 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	TAM41	P53230	385 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	CAF120	P53836	1060 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	VMS1	Q04311	632 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	YML053C	Q04978	212 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	FUS2	Q05670	677 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	PUS1	Q12211	544 aa	Known RBP	10.54	□□□□□ -0.72
SAM1	YLR180W	STB3	Q12427	513 aa		10.54	□□□□□ -0.72
SAM1	YLR180W	RPS9A	O13516	197 aa	Known RBP	10.53	□□□□□ -0.72
SAM1	YLR180W	FUS1	P11710	512 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	ROG3	P43602	733 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	ZAP1	P47043	880 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	BFA1	P47113	574 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	SSL2	Q00578	843 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	CWC21	Q03375	135 aa	Known RBP	10.53	□□□□□ -0.72
SAM1	YLR180W	YHM2	Q04013	314 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	FMP25	Q08023	583 aa		10.53	□□□□□ -0.72
SAM1	YLR180W	RPC53	P25441	422 aa		10.52	□□□□□ -0.73
SAM1	YLR180W	MRF1	P30775	413 aa	Predicted RBP	10.52	□□□□□ -0.73
SAM1	YLR180W	HIR1	P32479	840 aa		10.52	□□□□□ -0.73
SAM1	YLR180W	ATH1	P48016	1211 aa		10.52	□□□□□ -0.73
SAM1	YLR180W	YGR153W	P48238	217 aa		10.52	□□□□□ -0.73
SAM1	YLR180W	STB4	P50104	949 aa		10.52	□□□□□ -0.73
SAM1	YLR180W	SDA1	P53313	767 aa	Known RBP	10.52	□□□□□ -0.73
SAM1	YLR180W	TUF1	P02992	437 aa	Known RBP	10.51	□□□□□ -0.73
SAM1	YLR180W	CYS3	P31373	394 aa	Known RBP	10.51	□□□□□ -0.73
SAM1	YLR180W	SAC6	P32599	642 aa	Known RBP	10.51	□□□□□ -0.73
SAM1	YLR180W	VPS35	P34110	944 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	SIP3	P38717	1229 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	PIH1	P38768	344 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	FMO1	P38866	432 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	ENV11	P53246	860 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	CAF130	P53280	1122 aa	Predicted RBP	10.51	□□□□□ -0.73
SAM1	YLR180W	SPC98	P53540	846 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	TRS130	Q03660	1102 aa		10.51	□□□□□ -0.73
SAM1	YLR180W	GFD1	Q04839	188 aa	Known RBP	10.51	□□□□□ -0.73
SAM1	YLR180W	HOM2	P13663	365 aa	Known RBP	10.5	□□□□□ -0.73
SAM1	YLR180W	ECM32	P32644	1121 aa	Known RBP	10.5	□□□□□ -0.73
SAM1	YLR180W	SIP5	P40210	489 aa	Known RBP	10.5	□□□□□ -0.73
SAM1	YLR180W	THI6	P41835	540 aa		10.5	□□□□□ -0.73
SAM1	YLR180W	CBK1	P53894	756 aa		10.5	□□□□□ -0.73
SAM1	YLR180W	ADA2	Q02336	434 aa		10.5	□□□□□ -0.73
SAM1	YLR180W	WAR1	Q03631	944 aa		10.5	□□□□□ -0.73
SAM1	YLR180W	FOB1	O13329	566 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	CKA2	P19454	339 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	SPO11	P23179	398 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	CDC15	P27636	974 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	PRR1	P28708	518 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	ADE17	P38009	592 aa	Known RBP	10.49	□□□□□ -0.73
SAM1	YLR180W	MMS4	P38257	691 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	VTC2	P43585	828 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	ARK1	P53974	638 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	SLG1	P54867	378 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	STP1	Q00947	519 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	SHS1	Q07657	551 aa		10.49	□□□□□ -0.73
SAM1	YLR180W	BEM2	P39960	2167 aa	Known RBP	10.49	□□□□□ -0.73
SAM1	YLR180W	CYC8	P14922	966 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.48	□□□□□ -0.73	not detected
SAM1	YLR180W	BCD1	P38772	366 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	VTC3	Q02725	835 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	ESC2	Q06340	456 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	PDH1	Q12428	516 aa	Known RBP	10.48	□□□□□ -0.73
SAM1	YLR180W	APM4	Q99186	491 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	MSB2	P32334	1306 aa		10.48	□□□□□ -0.73
SAM1	YLR180W	RPL4A	P10664	362 aa	Known RBP	10.47	□□□□□ -0.73
SAM1	YLR180W	SPC110	P32380	944 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	PGM2	P37012	569 aa	Known RBP	10.47	□□□□□ -0.73
SAM1	YLR180W	POL12	P38121	705 aa	Predicted RBP	10.47	□□□□□ -0.73
SAM1	YLR180W	YBR284W	P38150	797 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	RGD1	P38339	666 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	RPL4B	P49626	362 aa	Known RBP	10.47	□□□□□ -0.73
SAM1	YLR180W	UBA2	P52488	636 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	SHE10	P53075	577 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	YNR061C	P53747	219 aa		10.47	□□□□□ -0.73
SAM1	YLR180W	SPE3	Q12074	293 aa	Known RBP	10.47	□□□□□ -0.73
SAM1	YLR180W	NAM7	P30771	971 aa	Known RBP	10.46	□□□□□ -0.73
SAM1	YLR180W	TRM2	P33753	639 aa		10.46	□□□□□ -0.73
SAM1	YLR180W	NMD3	P38861	518 aa	Known RBP	10.46	□□□□□ -0.73
SAM1	YLR180W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	10.46	□□□□□ -0.73	RIP-Chip
SAM1	YLR180W	ADY4	Q05955	493 aa		10.46	□□□□□ -0.73
SAM1	YLR180W	LEA1	Q08963	238 aa	Predicted RBP	10.46	□□□□□ -0.73
SAM1	YLR180W	GAL80	P04387	435 aa		10.45	□□□□□ -0.74
SAM1	YLR180W	PFK1	P16861	987 aa	Known RBP	10.45	□□□□□ -0.74
SAM1	YLR180W	DUG2	P38149	878 aa		10.45	□□□□□ -0.74
SAM1	YLR180W	PSY4	P38193	441 aa		10.45	□□□□□ -0.74
SAM1	YLR180W	MED6	P38782	295 aa		10.45	□□□□□ -0.74
SAM1	YLR180W	UBP5	P39944	805 aa		10.45	□□□□□ -0.74
SAM1	YLR180W	LSB3	P43603	459 aa	Known RBP	10.45	□□□□□ -0.74

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms