RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	TY1A-DR2	Q03964	440 aa	Known RBP	5.24	□□□□□ -1.57
APS1	YLR170C	TCO89	Q08921	799 aa		5.24	□□□□□ -1.57
APS1	YLR170C	APC11	Q12157	165 aa		5.24	□□□□□ -1.57
APS1	YLR170C	STB3	Q12427	513 aa		5.24	□□□□□ -1.57
APS1	YLR170C	YOR131C	Q12486	218 aa		5.24	□□□□□ -1.57
APS1	YLR170C	RKM4	Q12504	494 aa		5.24	□□□□□ -1.57
APS1	YLR170C	HEM1	P09950	548 aa	Predicted RBP	5.23	□□□□□ -1.57
APS1	YLR170C	NPR3	P38742	1146 aa		5.23	□□□□□ -1.57
APS1	YLR170C	BCD1	P38772	366 aa		5.23	□□□□□ -1.57
APS1	YLR170C	YER130C	P39959	443 aa		5.23	□□□□□ -1.57
APS1	YLR170C	ALA1	P40825	983 aa	Known RBP	5.23	□□□□□ -1.57
APS1	YLR170C	VID30	P53076	958 aa		5.23	□□□□□ -1.57
APS1	YLR170C	YNR021W	P53723	404 aa	Known RBP	5.23	□□□□□ -1.57
APS1	YLR170C	PGA2	P53903	129 aa		5.23	□□□□□ -1.57
APS1	YLR170C	DAK1	P54838	584 aa	Known RBP	5.23	□□□□□ -1.57
APS1	YLR170C	MSC2	Q03455	724 aa		5.23	□□□□□ -1.57
APS1	YLR170C	YDL057W	Q07379	328 aa		5.23	□□□□□ -1.57
APS1	YLR170C	FKS1	P38631	1876 aa	Known RBP	5.22	□□□□□ -1.57
APS1	YLR170C	DED1	P06634	604 aa	Known RBP	5.22	□□□□□ -1.57
APS1	YLR170C	PCK1	P10963	549 aa		5.22	□□□□□ -1.57
APS1	YLR170C	PFK1	P16861	987 aa	Known RBP	5.22	□□□□□ -1.57
APS1	YLR170C	UBC1	P21734	215 aa	Known RBP	5.22	□□□□□ -1.57
APS1	YLR170C	UIP5	P36137	443 aa		5.22	□□□□□ -1.57
APS1	YLR170C	LDH1	P38139	375 aa		5.22	□□□□□ -1.57
APS1	YLR170C	POA1	P38218	177 aa		5.22	□□□□□ -1.57
APS1	YLR170C	HUL5	P53119	910 aa		5.22	□□□□□ -1.57
APS1	YLR170C	GUP1	P53154	560 aa		5.22	□□□□□ -1.57
APS1	YLR170C	YGL081W	P53156	320 aa		5.22	□□□□□ -1.57
APS1	YLR170C	YLH47	Q06493	454 aa		5.22	□□□□□ -1.57
APS1	YLR170C	ATG11	Q12527	1178 aa		5.22	□□□□□ -1.57
APS1	YLR170C	VPS13	Q07878	3144 aa		5.21	□□□□□ -1.58
APS1	YLR170C	PDC6	P26263	563 aa	Known RBP	5.21	□□□□□ -1.58
APS1	YLR170C	GSY2	P27472	705 aa		5.21	□□□□□ -1.58
APS1	YLR170C	DPH2	P32461	534 aa		5.21	□□□□□ -1.58
APS1	YLR170C	YSC83	P32792	385 aa		5.21	□□□□□ -1.58
APS1	YLR170C	COT1	P32798	439 aa		5.21	□□□□□ -1.58
APS1	YLR170C	MNN4	P36044	1178 aa		5.21	□□□□□ -1.58
APS1	YLR170C	ARL1	P38116	183 aa	Known RBP	5.21	□□□□□ -1.58
APS1	YLR170C	PIH1	P38768	344 aa		5.21	□□□□□ -1.58
APS1	YLR170C	YFL040W	P43562	540 aa		5.21	□□□□□ -1.58
APS1	YLR170C	SUM1	P46676	1062 aa		5.21	□□□□□ -1.58
APS1	YLR170C	SMC5	Q08204	1093 aa		5.21	□□□□□ -1.58
APS1	YLR170C	CDC53	Q12018	815 aa	Known RBP	5.21	□□□□□ -1.58
APS1	YLR170C	YLL058W	Q12198	575 aa		5.21	□□□□□ -1.58
APS1	YLR170C	RTP1	Q12751	981 aa		5.21	□□□□□ -1.58
APS1	YLR170C	MAS2	P11914	482 aa		5.2	□□□□□ -1.58
APS1	YLR170C	CDC15	P27636	974 aa		5.2	□□□□□ -1.58
APS1	YLR170C	MSS51	P32335	436 aa		5.2	□□□□□ -1.58
APS1	YLR170C	TMT1	P32643	299 aa		5.2	□□□□□ -1.58
APS1	YLR170C	SMY2	P32909	740 aa	Known RBP	5.2	□□□□□ -1.58
APS1	YLR170C	DUR3	P33413	735 aa		5.2	□□□□□ -1.58
APS1	YLR170C	PXL1	P36166	706 aa		5.2	□□□□□ -1.58
APS1	YLR170C	RKM3	P38222	552 aa		5.2	□□□□□ -1.58
APS1	YLR170C	GUA1	P38625	525 aa	Known RBP	5.2	□□□□□ -1.58
APS1	YLR170C	YAP1801	P38856	637 aa		5.2	□□□□□ -1.58
APS1	YLR170C	UBP5	P39944	805 aa		5.2	□□□□□ -1.58
APS1	YLR170C	ULP2	P40537	1034 aa	Predicted RBP	5.2	□□□□□ -1.58
APS1	YLR170C	NCS2	P53923	493 aa	Predicted RBP	5.2	□□□□□ -1.58
APS1	YLR170C	ECM7	Q06200	448 aa		5.2	□□□□□ -1.58
APS1	YLR170C	GPI13	Q07830	1017 aa		5.2	□□□□□ -1.58
APS1	YLR170C	IES4	Q08561	116 aa		5.2	□□□□□ -1.58
APS1	YLR170C	YPL277C	Q08989	487 aa		5.2	□□□□□ -1.58
APS1	YLR170C	TAF13	P11747	167 aa		5.19	□□□□□ -1.58
APS1	YLR170C	ATE1	P16639	503 aa		5.19	□□□□□ -1.58
APS1	YLR170C	NAM7	P30771	971 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	WHI3	P34761	661 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	MPE1	P35728	441 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	DID4	P36108	232 aa		5.19	□□□□□ -1.58
APS1	YLR170C	RRM3	P38766	723 aa		5.19	□□□□□ -1.58
APS1	YLR170C	BIM1	P40013	344 aa		5.19	□□□□□ -1.58
APS1	YLR170C	RPN3	P40016	523 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	AIP1	P46680	615 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	AZR1	P50080	613 aa		5.19	□□□□□ -1.58
APS1	YLR170C	NBP1	P52919	319 aa	Predicted RBP	5.19	□□□□□ -1.58
APS1	YLR170C	TAM41	P53230	385 aa		5.19	□□□□□ -1.58
APS1	YLR170C	EAF7	P53911	425 aa	Known RBP	5.19	□□□□□ -1.58
APS1	YLR170C	COG4	Q06096	861 aa		5.19	□□□□□ -1.58
APS1	YLR170C	PSR2	Q07949	397 aa		5.19	□□□□□ -1.58
APS1	YLR170C	HFI1	Q12060	488 aa		5.19	□□□□□ -1.58
APS1	YLR170C	HIF1	Q12373	385 aa		5.19	□□□□□ -1.58
APS1	YLR170C	TRS33	Q99394	268 aa		5.19	□□□□□ -1.58
APS1	YLR170C	ECM29	P38737	1868 aa		5.18	□□□□□ -1.58
APS1	YLR170C	DBP5	P20449	482 aa	Known RBP	5.18	□□□□□ -1.58
APS1	YLR170C	RPC53	P25441	422 aa		5.18	□□□□□ -1.58
APS1	YLR170C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
APS1	YLR170C	BIO2	P32451	375 aa		5.18	□□□□□ -1.58
APS1	YLR170C	ISF1	P32488	338 aa		5.18	□□□□□ -1.58
APS1	YLR170C	VPS35	P34110	944 aa		5.18	□□□□□ -1.58
APS1	YLR170C	GRS1	P38088	690 aa	Known RBP	5.18	□□□□□ -1.58
APS1	YLR170C	TBS1	P38114	1094 aa		5.18	□□□□□ -1.58
APS1	YLR170C	MRX3	P38172	270 aa		5.18	□□□□□ -1.58
APS1	YLR170C	UBP13	P38187	747 aa		5.18	□□□□□ -1.58
APS1	YLR170C	EFM2	P38347	419 aa		5.18	□□□□□ -1.58
APS1	YLR170C	FIR1	P40020	876 aa		5.18	□□□□□ -1.58
APS1	YLR170C	ALD5	P40047	520 aa	Known RBP	5.18	□□□□□ -1.58
APS1	YLR170C	LCB2	P40970	561 aa		5.18	□□□□□ -1.58
APS1	YLR170C	YFL034W	P43564	1073 aa		5.18	□□□□□ -1.58
APS1	YLR170C	AVT1	P47082	602 aa		5.18	□□□□□ -1.58
APS1	YLR170C	YGR237C	P50089	785 aa		5.18	□□□□□ -1.58
APS1	YLR170C	PSP2	P50109	593 aa	Known RBP	5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms