RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W SFP1P32432 683 aa5.52□□□□□ -1.53
NSE1YLR007W STE14P32584 239 aa5.52□□□□□ -1.53
NSE1YLR007W PCM1P38628 557 aaKnown RBP5.52□□□□□ -1.53
NSE1YLR007W MGS1P40151 587 aa5.52□□□□□ -1.53
NSE1YLR007W HLJ1P48353 224 aa5.52□□□□□ -1.53
NSE1YLR007W YGL081WP53156 320 aa5.52□□□□□ -1.53
NSE1YLR007W NOG2P53742 486 aaKnown RBP5.52□□□□□ -1.53
NSE1YLR007W SLU7Q02775 382 aaKnown RBP5.52□□□□□ -1.53
NSE1YLR007W HMI1Q12039 706 aa5.52□□□□□ -1.53
NSE1YLR007W RPS9AO13516 197 aaKnown RBP5.51□□□□□ -1.53
NSE1YLR007W PRP4P20053 465 aaKnown RBP5.51□□□□□ -1.53
NSE1YLR007W RPC82P32349 654 aa5.51□□□□□ -1.53
NSE1YLR007W TYE7P33122 291 aaPredicted RBP5.51□□□□□ -1.53
NSE1YLR007W RLP7P40693 322 aaKnown RBP5.51□□□□□ -1.53
NSE1YLR007W SDA1P53313 767 aaKnown RBP5.51□□□□□ -1.53
NSE1YLR007W DUS1P53759 423 aaKnown RBP5.51□□□□□ -1.53
NSE1YLR007W SNP1Q00916 300 aaPredicted RBP5.51□□□□□ -1.53
NSE1YLR007W GCN5Q03330 439 aa5.51□□□□□ -1.53
NSE1YLR007W CRR1Q05790 422 aa5.51□□□□□ -1.53
NSE1YLR007W YOL057WQ08225 711 aa5.51□□□□□ -1.53
NSE1YLR007W UPC2Q12151 913 aa5.51□□□□□ -1.53
NSE1YLR007W YLR149CQ99296 730 aa5.51□□□□□ -1.53
NSE1YLR007W HOG1P32485 435 aa5.5□□□□□ -1.53
NSE1YLR007W YKR051WP36142 418 aa5.5□□□□□ -1.53
NSE1YLR007W POA1P38218 177 aa5.5□□□□□ -1.53
NSE1YLR007W VPS62P53285 467 aa5.5□□□□□ -1.53
NSE1YLR007W UTP14Q04500 899 aaKnown RBP5.5□□□□□ -1.53
NSE1YLR007W GPB1Q08886 897 aa5.5□□□□□ -1.53
NSE1YLR007W THI21Q08975 551 aa5.5□□□□□ -1.53
NSE1YLR007W PRC1P00729 532 aa5.49□□□□□ -1.53
NSE1YLR007W CDC20P26309 610 aa5.49□□□□□ -1.53
NSE1YLR007W PMC1P38929 1173 aaPredicted RBP5.49□□□□□ -1.53
NSE1YLR007W MSS4P38994 779 aa5.49□□□□□ -1.53
NSE1YLR007W YJR096WP47137 282 aa5.49□□□□□ -1.53
NSE1YLR007W YJR120WP47157 116 aa5.49□□□□□ -1.53
NSE1YLR007W REH1Q06709 432 aa5.49□□□□□ -1.53
NSE1YLR007W GPR1Q12361 961 aa5.49□□□□□ -1.53
NSE1YLR007W MNN4P36044 1178 aa5.48□□□□□ -1.53
NSE1YLR007W TYS1P36421 394 aaKnown RBP5.48□□□□□ -1.53
NSE1YLR007W GRX7P38068 203 aa5.48□□□□□ -1.53
NSE1YLR007W MET12P46151 657 aa5.48□□□□□ -1.53
NSE1YLR007W MTQ2Q03920 221 aaPredicted RBP5.48□□□□□ -1.53
NSE1YLR007W NUP145P49687 1317 aa5.48□□□□□ -1.53
NSE1YLR007W DIF1O13577 133 aa5.47□□□□□ -1.53
NSE1YLR007W SAP190P36123 1033 aa5.47□□□□□ -1.53
NSE1YLR007W CTF8P38877 133 aa5.47□□□□□ -1.53
NSE1YLR007W SET5P38890 526 aaKnown RBP5.47□□□□□ -1.53
NSE1YLR007W SDP1P40479 209 aa5.47□□□□□ -1.53
NSE1YLR007W YGR237CP50089 785 aa5.47□□□□□ -1.53
NSE1YLR007W SPT20P50875 604 aa5.47□□□□□ -1.53
NSE1YLR007W NCS6P53088 359 aa5.47□□□□□ -1.53
NSE1YLR007W PUS2P53167 370 aa5.47□□□□□ -1.53
NSE1YLR007W LEE1Q02799 301 aaKnown RBP5.47□□□□□ -1.53
NSE1YLR007W UME1Q03010 460 aa5.47□□□□□ -1.53
NSE1YLR007W GUP2Q08929 609 aa5.47□□□□□ -1.53
NSE1YLR007W HIS5P07172 385 aa5.46□□□□□ -1.54
NSE1YLR007W TUB3P09734 445 aaKnown RBP5.46□□□□□ -1.54
NSE1YLR007W KAR1P11927 433 aa5.46□□□□□ -1.54
NSE1YLR007W CCR4P31384 837 aaKnown RBP5.46□□□□□ -1.54
NSE1YLR007W SEC21P32074 935 aaKnown RBP5.46□□□□□ -1.54
NSE1YLR007W URM1P40554 99 aaPredicted RBP5.46□□□□□ -1.54
NSE1YLR007W GPP1P41277 250 aaKnown RBP5.46□□□□□ -1.54
NSE1YLR007W SHR5P41912 237 aa5.46□□□□□ -1.54
NSE1YLR007W CHA4P43634 648 aa5.46□□□□□ -1.54
NSE1YLR007W ARP4P80428 489 aa5.46□□□□□ -1.54
NSE1YLR007W NHX1Q04121 633 aa5.46□□□□□ -1.54
NSE1YLR007W ECM16Q04217 1267 aaKnown RBP5.46□□□□□ -1.54
NSE1YLR007W DAL3P32459 195 aa5.45□□□□□ -1.54
NSE1YLR007W PLB1P39105 664 aa5.45□□□□□ -1.54
NSE1YLR007W ZIP2P53061 704 aa5.45□□□□□ -1.54
NSE1YLR007W YLR224WQ05947 369 aa5.45□□□□□ -1.54
NSE1YLR007W YDL121CQ07541 149 aa5.45□□□□□ -1.54
NSE1YLR007W ACK1Q07622 623 aaPredicted RBP5.45□□□□□ -1.54
NSE1YLR007W GUD1Q07729 489 aa5.45□□□□□ -1.54
NSE1YLR007W LAS17Q12446 633 aa5.45□□□□□ -1.54
NSE1YLR007W KCS1Q12494 1050 aa5.45□□□□□ -1.54
NSE1YLR007W PRE10P21242 288 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
NSE1YLR007W SSY5P47002 699 aa5.44□□□□□ -1.54
NSE1YLR007W MRPS35P53292 345 aa5.44□□□□□ -1.54
NSE1YLR007W VPS30Q02948 557 aa5.44□□□□□ -1.54
NSE1YLR007W CLU1Q03690 1277 aaKnown RBP5.44□□□□□ -1.54
NSE1YLR007W TMA17Q12513 150 aa5.44□□□□□ -1.54
NSE1YLR007W YLR358CO13565 187 aa5.43□□□□□ -1.54
NSE1YLR007W PRP19P32523 503 aaKnown RBP5.43□□□□□ -1.54
NSE1YLR007W LST4P34239 828 aa5.43□□□□□ -1.54
NSE1YLR007W ENP1P38333 483 aaKnown RBP5.43□□□□□ -1.54
NSE1YLR007W YHR078WP38799 552 aa5.43□□□□□ -1.54
NSE1YLR007W SAK1P38990 1142 aa5.43□□□□□ -1.54
NSE1YLR007W PSP2P50109 593 aaKnown RBP5.43□□□□□ -1.54
NSE1YLR007W TMA10Q06177 86 aa5.43□□□□□ -1.54
NSE1YLR007W NPC2Q12408 173 aa5.43□□□□□ -1.54
NSE1YLR007W ERP2P39704 215 aa5.42□□□□□ -1.54
NSE1YLR007W PFA3P42836 336 aa5.42□□□□□ -1.54
NSE1YLR007W NPY1P53164 384 aa5.42□□□□□ -1.54
NSE1YLR007W CEF1Q03654 590 aaPredicted RBP5.42□□□□□ -1.54
NSE1YLR007W MUS81Q04149 632 aaPredicted RBP5.42□□□□□ -1.54
NSE1YLR007W TMA64Q04600 565 aaKnown RBP5.42□□□□□ -1.54
NSE1YLR007W SED4P25365 1065 aa5.41□□□□□ -1.54
NSE1YLR007W CTS1P29029 562 aa5.41□□□□□ -1.54
NSE1YLR007W YEL1P34225 687 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms