RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C HCR1Q05775 265 aaKnown RBP11.08□□□□□ -0.64
SHB17YKR043C ESC8Q08119 714 aa11.08□□□□□ -0.64
SHB17YKR043C CDC37P06101 506 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C ATE1P16639 503 aa11.07□□□□□ -0.64
SHB17YKR043C ROX1P25042 368 aa11.07□□□□□ -0.64
SHB17YKR043C SEC21P32074 935 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C RAD54P32863 898 aa11.07□□□□□ -0.64
SHB17YKR043C PTC4P38089 393 aa11.07□□□□□ -0.64
SHB17YKR043C ARL1P38116 183 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C PSY4P38193 441 aa11.07□□□□□ -0.64
SHB17YKR043C YHR054CP38780 354 aa11.07□□□□□ -0.64
SHB17YKR043C FTR1P40088 404 aa11.07□□□□□ -0.64
SHB17YKR043C STB4P50104 949 aa11.07□□□□□ -0.64
SHB17YKR043C EAF7P53911 425 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C RCR2Q03446 210 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C GIR2Q03768 265 aaPredicted RBP11.07□□□□□ -0.64
SHB17YKR043C SGT2Q12118 346 aaKnown RBP11.07□□□□□ -0.64
SHB17YKR043C NAT1P12945 854 aaKnown RBP11.06□□□□□ -0.64
SHB17YKR043C RPC25P35718 212 aa11.06□□□□□ -0.64
SHB17YKR043C FIG4P42837 879 aa11.06□□□□□ -0.64
SHB17YKR043C DAS1P47005 663 aa11.06□□□□□ -0.64
SHB17YKR043C TMA16Q08687 178 aa11.06□□□□□ -0.64
SHB17YKR043C SLX4Q12098 748 aa11.06□□□□□ -0.64
SHB17YKR043C CTF3Q12748 733 aa11.06□□□□□ -0.64
SHB17YKR043C HAP2P06774 265 aa11.05□□□□□ -0.64
SHB17YKR043C CIT2P08679 460 aa11.05□□□□□ -0.64
SHB17YKR043C GCS1P35197 352 aa11.05□□□□□ -0.64
SHB17YKR043C YET1P35723 206 aa11.05□□□□□ -0.64
SHB17YKR043C YEL023CP39992 682 aa11.05□□□□□ -0.64
SHB17YKR043C SSL2Q00578 843 aa11.05□□□□□ -0.64
SHB17YKR043C SPO71Q03868 1245 aa11.05□□□□□ -0.64
SHB17YKR043C YLR422WQ06409 1932 aa11.05□□□□□ -0.64
SHB17YKR043C IME1P21190 360 aa11.04□□□□□ -0.64
SHB17YKR043C SWI3P32591 825 aa11.04□□□□□ -0.64
SHB17YKR043C TBF1Q02457 562 aa11.04□□□□□ -0.64
SHB17YKR043C CDD1Q06549 142 aa11.04□□□□□ -0.64
SHB17YKR043C REC8Q12188 680 aa11.04□□□□□ -0.64
SHB17YKR043C GIS3Q12418 502 aa11.04□□□□□ -0.64
SHB17YKR043C APL1P27351 700 aa11.03□□□□□ -0.64
SHB17YKR043C MNR2P35724 969 aa11.03□□□□□ -0.64
SHB17YKR043C COS5P47187 383 aa11.03□□□□□ -0.64
SHB17YKR043C SPC98P53540 846 aa11.03□□□□□ -0.64
SHB17YKR043C STP1Q00947 519 aa11.03□□□□□ -0.64
SHB17YKR043C MRI1Q06489 411 aaKnown RBP11.03□□□□□ -0.64
SHB17YKR043C SPO75Q07798 868 aa11.03□□□□□ -0.64
SHB17YKR043C SDH5Q08230 162 aa11.03□□□□□ -0.64
SHB17YKR043C MRN1Q08925 612 aaKnown RBP RIP-Chip data11.03□□□□□ -0.64not detected
SHB17YKR043C YMR084WA2P2R3 262 aa11.02□□□□□ -0.65
SHB17YKR043C SYN8P31377 255 aa11.02□□□□□ -0.65
SHB17YKR043C YKL023WP36103 277 aaKnown RBP11.02□□□□□ -0.65
SHB17YKR043C EFM2P38347 419 aa11.02□□□□□ -0.65
SHB17YKR043C APM2P38700 605 aa11.02□□□□□ -0.65
SHB17YKR043C CTM1P38818 585 aa11.02□□□□□ -0.65
SHB17YKR043C RPA49Q01080 415 aaPredicted RBP11.02□□□□□ -0.65
SHB17YKR043C WAR1Q03631 944 aa11.02□□□□□ -0.65
SHB17YKR043C CEF1Q03654 590 aaPredicted RBP11.02□□□□□ -0.65
SHB17YKR043C RGA2Q06407 1009 aa11.02□□□□□ -0.65
SHB17YKR043C IWR1Q07532 353 aaPredicted RBP11.02□□□□□ -0.65
SHB17YKR043C YDL206WQ12424 762 aa11.02□□□□□ -0.65
SHB17YKR043C GAL80P04387 435 aa11.01□□□□□ -0.65
SHB17YKR043C CDC42P19073 191 aa11.01□□□□□ -0.65
SHB17YKR043C PEX2P32800 271 aa11.01□□□□□ -0.65
SHB17YKR043C HMT1P38074 348 aa11.01□□□□□ -0.65
SHB17YKR043C RKM3P38222 552 aa11.01□□□□□ -0.65
SHB17YKR043C YHR131CP38835 850 aa11.01□□□□□ -0.65
SHB17YKR043C MMF1P40185 145 aaKnown RBP11.01□□□□□ -0.65
SHB17YKR043C YIR016WP40572 265 aa11.01□□□□□ -0.65
SHB17YKR043C NOP13P53883 403 aaKnown RBP RIP-Chip data11.01□□□□□ -0.65not detected
SHB17YKR043C YLR297WQ05899 129 aa11.01□□□□□ -0.65
SHB17YKR043C PLP2Q12017 286 aa11.01□□□□□ -0.65
SHB17YKR043C RRT12P25381 491 aa11□□□□□ -0.65
SHB17YKR043C KIC1P38692 1080 aa11□□□□□ -0.65
SHB17YKR043C MIP6P38760 659 aaKnown RBP11□□□□□ -0.65
SHB17YKR043C SIP5P40210 489 aaKnown RBP11□□□□□ -0.65
SHB17YKR043C POL31P46957 487 aa11□□□□□ -0.65
SHB17YKR043C SMC3P47037 1230 aa11□□□□□ -0.65
SHB17YKR043C CPR7P47103 393 aa11□□□□□ -0.65
SHB17YKR043C NUT1P53114 1132 aa11□□□□□ -0.65
SHB17YKR043C CSR1Q06705 408 aaKnown RBP11□□□□□ -0.65
SHB17YKR043C ABP140Q08641 628 aaKnown RBP11□□□□□ -0.65
SHB17YKR043C LAA1P39526 2014 aa10.99□□□□□ -0.65
SHB17YKR043C VPS3P23643 1011 aa10.99□□□□□ -0.65
SHB17YKR043C CDC11P32458 415 aa10.99□□□□□ -0.65
SHB17YKR043C CBF2P32504 956 aa10.99□□□□□ -0.65
SHB17YKR043C TBS1P38114 1094 aa10.99□□□□□ -0.65
SHB17YKR043C SPT8P38915 602 aa10.99□□□□□ -0.65
SHB17YKR043C FYV8P46949 817 aaKnown RBP10.99□□□□□ -0.65
SHB17YKR043C ALT1P52893 592 aa10.99□□□□□ -0.65
SHB17YKR043C UBP3Q01477 912 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
SHB17YKR043C TIF35Q04067 274 aaKnown RBP10.99□□□□□ -0.65
SHB17YKR043C YML083CQ04526 418 aa10.99□□□□□ -0.65
SHB17YKR043C ATP1P07251 545 aaKnown RBP10.98□□□□□ -0.65
SHB17YKR043C COX11P19516 300 aaKnown RBP10.98□□□□□ -0.65
SHB17YKR043C SCJ1P25303 377 aa10.98□□□□□ -0.65
SHB17YKR043C KNS1P32350 737 aaPredicted RBP10.98□□□□□ -0.65
SHB17YKR043C VPH1P32563 840 aaKnown RBP10.98□□□□□ -0.65
SHB17YKR043C SHM1P37292 490 aaPredicted RBP10.98□□□□□ -0.65
SHB17YKR043C AGP2P38090 596 aa10.98□□□□□ -0.65
SHB17YKR043C YBR284WP38150 797 aa10.98□□□□□ -0.65
SHB17YKR043C CCC2P38995 1004 aa10.98□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms