RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	SKG6	P32900	734 aa	Predicted RBP	4.23	□□□□□ -1.73
LOS1	YKL205W	YEL1	P34225	687 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	TRZ1	P36159	838 aa	Predicted RBP	4.23	□□□□□ -1.73
LOS1	YKL205W	POL12	P38121	705 aa	Predicted RBP	4.23	□□□□□ -1.73
LOS1	YKL205W	YHL026C	P38740	315 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	FIR1	P40020	876 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	ADA2	Q02336	434 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	TRS130	Q03660	1102 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	ATG16	Q03818	150 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	SML1	Q04964	104 aa		4.23	□□□□□ -1.73
LOS1	YKL205W	HCR1	Q05775	265 aa	Known RBP	4.23	□□□□□ -1.73
LOS1	YKL205W	PUS1	Q12211	544 aa	Known RBP	4.23	□□□□□ -1.73
LOS1	YKL205W	ATP1	P07251	545 aa	Known RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	RNR1	P21524	888 aa	Known RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	IRE1	P32361	1115 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	TRM2	P33753	639 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	SKP2	P42843	763 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	ZAP1	P47043	880 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	UBP15	P50101	1230 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	YML002W	P0CF17	737 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	DBP1	P24784	617 aa	Known RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	BYE1	P36106	594 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	FTH1	P38310	465 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	FHL1	P39521	936 aa		4.22	□□□□□ -1.73
LOS1	YKL205W	SHQ1	P40486	507 aa	Predicted RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	RPL34B	P40525	121 aa	Known RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	YGL039W	P53183	348 aa	Known RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	MTG1	Q03151	367 aa	Predicted RBP	4.22	□□□□□ -1.73
LOS1	YKL205W	HAP2	P06774	265 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	MCM2	P29469	868 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	DSS4	P32601	143 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	YHR202W	P38887	602 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	DIP5	P53388	608 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	SLG1	P54867	378 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	SSL2	Q00578	843 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	SGD1	Q06132	899 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	OPY2	Q06810	360 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	RTP1	Q12751	981 aa		4.21	□□□□□ -1.73
LOS1	YKL205W	CIT2	P08679	460 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ASP3-2	P0CX77	362 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ASP3-3	P0CX78	362 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ASP3-4	P0CX79	362 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ASP3-1	P0CZ17	362 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	MUD1	P32605	298 aa	Known RBP	4.21	□□□□□ -1.74
LOS1	YKL205W	ABD1	P32783	436 aa	Predicted RBP	4.21	□□□□□ -1.74
LOS1	YKL205W	SLA2	P33338	968 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	DID4	P36108	232 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	LEO1	P38439	464 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	MND2	P40577	368 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	PXA1	P41909	870 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	YFL052W	P43551	465 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	SPO74	P45819	413 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	CTR1	P49573	406 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	TAD1	P53065	400 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	LSC2	P53312	427 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	YPL014W	Q02606	381 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	YDR222W	Q04925	415 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	SDH5	Q08230	162 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
LOS1	YKL205W	DYS1	P38791	387 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	TVP23	P38962	199 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ALD5	P40047	520 aa	Known RBP	4.21	□□□□□ -1.74
LOS1	YKL205W	MMF1	P40185	145 aa	Known RBP	4.21	□□□□□ -1.74
LOS1	YKL205W	FOL2	P51601	243 aa	Known RBP	4.21	□□□□□ -1.74
LOS1	YKL205W	YMR018W	Q04364	514 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	OSW2	Q12202	724 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	ECM3	Q99252	613 aa		4.21	□□□□□ -1.74
LOS1	YKL205W	BI2	P03873	423 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	BI4	P03879	638 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	OM45	P16547	393 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	RAD57	P25301	460 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	ARG2	P40360	574 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	OPT1	P40897	799 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	VPS62	P53285	467 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	SMD2	Q06217	110 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	AVL9	Q12500	764 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	BI3	Q9ZZW7	517 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	CYC8	P14922	966 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	CSG2	P35206	410 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	SET5	P38890	526 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	RPN3	P40016	523 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	YJR107W	P47145	328 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	CLA4	P48562	842 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	ADE12	P80210	433 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	MET14	Q02196	202 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	KAP95	Q06142	861 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	AFT2	Q08957	416 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	YPR027C	Q12079	277 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	ATG11	Q12527	1178 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	TUF1	P02992	437 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	WHI2	P12611	486 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	DAL7	P21826	554 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	SYN8	P31377	255 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	CNS1	P33313	385 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	MIC60	P36112	540 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	PPS1	P38148	807 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	EAF5	P39995	279 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	SLX8	P40072	274 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	ULI1	P43604	169 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	TOS3	P43637	560 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms