RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	EMC3	P36039	253 aa		4.99	□□□□□ -1.61
IST3	YIR005W	YIR042C	P40586	236 aa		4.99	□□□□□ -1.61
IST3	YIR005W	MUS81	Q04149	632 aa	Predicted RBP	4.99	□□□□□ -1.61
IST3	YIR005W	YOR022C	Q12204	715 aa		4.99	□□□□□ -1.61
IST3	YIR005W	NDJ1	Q12366	352 aa		4.99	□□□□□ -1.61
IST3	YIR005W	OSH2	Q12451	1283 aa		4.99	□□□□□ -1.61
IST3	YIR005W	YLR415C	O13578	112 aa		4.98	□□□□□ -1.61
IST3	YIR005W	PRC1	P00729	532 aa		4.98	□□□□□ -1.61
IST3	YIR005W	SIC1	P38634	284 aa		4.98	□□□□□ -1.61
IST3	YIR005W	DAL7	P21826	554 aa		4.97	□□□□□ -1.61
IST3	YIR005W	PAM1	P37304	830 aa	Known RBP	4.97	□□□□□ -1.61
IST3	YIR005W	PCL5	P38794	229 aa		4.97	□□□□□ -1.61
IST3	YIR005W	GGA2	P38817	585 aa	Known RBP	4.97	□□□□□ -1.61
IST3	YIR005W	SAK1	P38990	1142 aa		4.97	□□□□□ -1.61
IST3	YIR005W	PFA3	P42836	336 aa		4.97	□□□□□ -1.61
IST3	YIR005W	UBP6	P43593	499 aa	Known RBP	4.97	□□□□□ -1.61
IST3	YIR005W	SSY5	P47002	699 aa		4.97	□□□□□ -1.61
IST3	YIR005W	TAD1	P53065	400 aa		4.97	□□□□□ -1.61
IST3	YIR005W	RSC3	Q06639	885 aa		4.97	□□□□□ -1.61
IST3	YIR005W	LAT1	P12695	482 aa	Known RBP	4.96	□□□□□ -1.62
IST3	YIR005W	TOP3	P13099	656 aa		4.96	□□□□□ -1.62
IST3	YIR005W	CDC43	P18898	376 aa		4.96	□□□□□ -1.62
IST3	YIR005W	HSP60	P19882	572 aa	Known RBP	4.96	□□□□□ -1.62
IST3	YIR005W	HCA4	P20448	770 aa	Known RBP	4.96	□□□□□ -1.62
IST3	YIR005W	HSV2	P50079	448 aa	Predicted RBP	4.96	□□□□□ -1.62
IST3	YIR005W	SAP190	P36123	1033 aa		4.95	□□□□□ -1.62
IST3	YIR005W	TDP1	P38319	544 aa		4.95	□□□□□ -1.62
IST3	YIR005W	DAM1	P53267	343 aa		4.95	□□□□□ -1.62
IST3	YIR005W	LRS4	Q04087	347 aa	Known RBP	4.95	□□□□□ -1.62
IST3	YIR005W	REH1	Q06709	432 aa		4.95	□□□□□ -1.62
IST3	YIR005W	YDL124W	Q07551	312 aa	Known RBP	4.95	□□□□□ -1.62
IST3	YIR005W	SGO1	Q08490	590 aa		4.95	□□□□□ -1.62
IST3	YIR005W	IRC13	Q08630	104 aa		4.95	□□□□□ -1.62
IST3	YIR005W	THI21	Q08975	551 aa		4.95	□□□□□ -1.62
IST3	YIR005W	RAD4	P14736	754 aa		4.94	□□□□□ -1.62
IST3	YIR005W	SET5	P38890	526 aa	Known RBP	4.94	□□□□□ -1.62
IST3	YIR005W	FMP52	P40008	231 aa		4.94	□□□□□ -1.62
IST3	YIR005W	GYP8	P43570	497 aa		4.94	□□□□□ -1.62
IST3	YIR005W	VPS73	P53142	486 aa	Known RBP	4.94	□□□□□ -1.62
IST3	YIR005W	YGR283C	P53336	341 aa	Predicted RBP	4.94	□□□□□ -1.62
IST3	YIR005W	SUT2	Q12286	268 aa		4.94	□□□□□ -1.62
IST3	YIR005W	ATG11	Q12527	1178 aa		4.94	□□□□□ -1.62
IST3	YIR005W	CIT1	P00890	479 aa		4.93	□□□□□ -1.62
IST3	YIR005W	YCL002C	P25565	263 aa		4.93	□□□□□ -1.62
IST3	YIR005W	TEL2	P53038	688 aa		4.93	□□□□□ -1.62
IST3	YIR005W	TGL5	Q12043	749 aa		4.93	□□□□□ -1.62
IST3	YIR005W	TOM70	P07213	617 aa	Known RBP	4.92	□□□□□ -1.62
IST3	YIR005W	KIN3	P22209	435 aa		4.92	□□□□□ -1.62
IST3	YIR005W	ILV6	P25605	309 aa	Known RBP	4.92	□□□□□ -1.62
IST3	YIR005W	PPZ2	P33329	710 aa		4.92	□□□□□ -1.62
IST3	YIR005W	BCD1	P38772	366 aa		4.92	□□□□□ -1.62
IST3	YIR005W	HUL4	P40985	892 aa		4.92	□□□□□ -1.62
IST3	YIR005W	SNM1	P40993	198 aa		4.92	□□□□□ -1.62
IST3	YIR005W	TAH11	P47112	604 aa		4.92	□□□□□ -1.62
IST3	YIR005W	SSL2	Q00578	843 aa		4.92	□□□□□ -1.62
IST3	YIR005W	TAF8	Q03750	510 aa		4.92	□□□□□ -1.62
IST3	YIR005W	GPR1	Q12361	961 aa		4.92	□□□□□ -1.62
IST3	YIR005W	BNR1	P40450	1375 aa		4.91	□□□□□ -1.62
IST3	YIR005W	HIS7	P33734	552 aa	Known RBP	4.91	□□□□□ -1.62
IST3	YIR005W	YBR259W	P38338	688 aa		4.91	□□□□□ -1.62
IST3	YIR005W	HOS4	P40480	1083 aa		4.91	□□□□□ -1.62
IST3	YIR005W	IMO32	P53219	342 aa		4.91	□□□□□ -1.62
IST3	YIR005W	YGR125W	P53273	1036 aa		4.91	□□□□□ -1.62
IST3	YIR005W	DMC1	P25453	334 aa		4.9	□□□□□ -1.63
IST3	YIR005W	PEX2	P32800	271 aa		4.9	□□□□□ -1.63
IST3	YIR005W	YIL166C	P40445	542 aa		4.9	□□□□□ -1.63
IST3	YIR005W	ALG2	P43636	503 aa		4.9	□□□□□ -1.63
IST3	YIR005W	TIM54	P47045	478 aa		4.9	□□□□□ -1.63
IST3	YIR005W	YDR514C	Q04408	483 aa		4.9	□□□□□ -1.63
IST3	YIR005W	MET6	P05694	767 aa	Known RBP	4.89	□□□□□ -1.63
IST3	YIR005W	TUB1	P09733	447 aa	Known RBP	4.89	□□□□□ -1.63
IST3	YIR005W	CBR1	P38626	284 aa	Known RBP	4.89	□□□□□ -1.63
IST3	YIR005W	RIX1	P38883	763 aa	Predicted RBP	4.89	□□□□□ -1.63
IST3	YIR005W	ECM1	P39715	212 aa		4.89	□□□□□ -1.63
IST3	YIR005W	YJL049W	P47048	450 aa		4.89	□□□□□ -1.63
IST3	YIR005W	MTR3	P48240	250 aa	Predicted RBP	4.89	□□□□□ -1.63
IST3	YIR005W	UBC11	P52492	156 aa		4.89	□□□□□ -1.63
IST3	YIR005W	YAP1802	P53309	568 aa		4.89	□□□□□ -1.63
IST3	YIR005W	SMX3	P54999	86 aa	Predicted RBP	4.89	□□□□□ -1.63
IST3	YIR005W	ATP25	Q03153	612 aa		4.89	□□□□□ -1.63
IST3	YIR005W	ASM4	Q05166	528 aa		4.89	□□□□□ -1.63
IST3	YIR005W	COQ11	Q05892	277 aa		4.89	□□□□□ -1.63
IST3	YIR005W	YBR182C-A	Q8TGU6	64 aa		4.89	□□□□□ -1.63
IST3	YIR005W	BAP3	P41815	604 aa		4.88	□□□□□ -1.63
IST3	YIR005W	SHR5	P41912	237 aa		4.88	□□□□□ -1.63
IST3	YIR005W	MET7	Q08645	548 aa		4.88	□□□□□ -1.63
IST3	YIR005W	YHR020W	P38708	688 aa	Known RBP	4.87	□□□□□ -1.63
IST3	YIR005W	RLP7	P40693	322 aa	Known RBP	4.87	□□□□□ -1.63
IST3	YIR005W	ZDS1	P50111	915 aa	Known RBP	4.87	□□□□□ -1.63
IST3	YIR005W	ZIP2	P53061	704 aa		4.87	□□□□□ -1.63
IST3	YIR005W	GAD1	Q04792	585 aa		4.87	□□□□□ -1.63
IST3	YIR005W	YNL162W-A	Q3E7A8	72 aa		4.87	□□□□□ -1.63
IST3	YIR005W	DIF1	O13577	133 aa		4.86	□□□□□ -1.63
IST3	YIR005W	HIR1	P32479	840 aa		4.86	□□□□□ -1.63
IST3	YIR005W	BET3	P36149	193 aa		4.86	□□□□□ -1.63
IST3	YIR005W	REV7	P38927	245 aa		4.86	□□□□□ -1.63
IST3	YIR005W	CCT3	P39077	534 aa	Known RBP	4.86	□□□□□ -1.63
IST3	YIR005W	FLC1	Q08967	793 aa		4.86	□□□□□ -1.63
IST3	YIR005W	SIR3	P06701	978 aa		4.85	□□□□□ -1.63
IST3	YIR005W	ADY2	P25613	283 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms