RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	RPN4	Q03465	531 aa		3.22	□□□□□ -1.89
URM1	YIL008W	GIS1	Q03833	894 aa		3.22	□□□□□ -1.89
URM1	YIL008W	DLT1	Q04216	342 aa		3.22	□□□□□ -1.89
URM1	YIL008W	RSC3	Q06639	885 aa		3.22	□□□□□ -1.89
URM1	YIL008W	PPM2	Q08282	695 aa		3.22	□□□□□ -1.89
URM1	YIL008W	MET7	Q08645	548 aa		3.22	□□□□□ -1.89
URM1	YIL008W	TRM13	Q12383	476 aa		3.22	□□□□□ -1.89
URM1	YIL008W	PPR1	P07272	904 aa	Predicted RBP	3.21	□□□□□ -1.9
URM1	YIL008W	MET3	P08536	511 aa		3.21	□□□□□ -1.9
URM1	YIL008W	RAD53	P22216	821 aa		3.21	□□□□□ -1.9
URM1	YIL008W	NGG1	P32494	702 aa		3.21	□□□□□ -1.9
URM1	YIL008W	YKL091C	P33324	310 aa	Known RBP	3.21	□□□□□ -1.9
URM1	YIL008W	OAR1	P35731	278 aa		3.21	□□□□□ -1.9
URM1	YIL008W	MOH1	P38191	138 aa		3.21	□□□□□ -1.9
URM1	YIL008W	GDH3	P39708	457 aa		3.21	□□□□□ -1.9
URM1	YIL008W	RLP7	P40693	322 aa	Known RBP	3.21	□□□□□ -1.9
URM1	YIL008W	ZDS1	P50111	915 aa	Known RBP	3.21	□□□□□ -1.9
URM1	YIL008W	PKH1	Q03407	766 aa		3.21	□□□□□ -1.9
URM1	YIL008W	MUS81	Q04149	632 aa	Predicted RBP	3.21	□□□□□ -1.9
URM1	YIL008W	THI21	Q08975	551 aa		3.21	□□□□□ -1.9
URM1	YIL008W	YBR182C-A	Q8TGU6	64 aa		3.21	□□□□□ -1.9
URM1	YIL008W	ERR1	P0CX10	437 aa		3.2	□□□□□ -1.9
URM1	YIL008W	ERR2	P0CX11	437 aa		3.2	□□□□□ -1.9
URM1	YIL008W	ELO3	P40319	345 aa		3.2	□□□□□ -1.9
URM1	YIL008W	FKH2	P41813	862 aa		3.2	□□□□□ -1.9
URM1	YIL008W	SHR5	P41912	237 aa		3.2	□□□□□ -1.9
URM1	YIL008W	TY4A-J	P47023	414 aa		3.2	□□□□□ -1.9
URM1	YIL008W	HXT16	P47185	567 aa		3.2	□□□□□ -1.9
URM1	YIL008W	HSV2	P50079	448 aa	Predicted RBP	3.2	□□□□□ -1.9
URM1	YIL008W	MRPS35	P53292	345 aa		3.2	□□□□□ -1.9
URM1	YIL008W	DIF1	O13577	133 aa		3.19	□□□□□ -1.9
URM1	YIL008W	YLR415C	O13578	112 aa		3.19	□□□□□ -1.9
URM1	YIL008W	CAF20	P12962	161 aa	Known RBP	3.19	□□□□□ -1.9
URM1	YIL008W	PER1	P25625	357 aa		3.19	□□□□□ -1.9
URM1	YIL008W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
URM1	YIL008W	BUD6	P41697	788 aa		3.19	□□□□□ -1.9
URM1	YIL008W	PFA3	P42836	336 aa		3.19	□□□□□ -1.9
URM1	YIL008W	AMA1	P50082	593 aa		3.19	□□□□□ -1.9
URM1	YIL008W	MUP1	P50276	574 aa		3.19	□□□□□ -1.9
URM1	YIL008W	ZIP2	P53061	704 aa		3.19	□□□□□ -1.9
URM1	YIL008W	FRE5	Q08908	694 aa		3.19	□□□□□ -1.9
URM1	YIL008W	ACF2	Q12168	779 aa		3.19	□□□□□ -1.9
URM1	YIL008W	TIM23	P32897	222 aa		3.18	□□□□□ -1.9
URM1	YIL008W	ALY2	P47029	1046 aa		3.18	□□□□□ -1.9
URM1	YIL008W	MTR3	P48240	250 aa	Predicted RBP	3.18	□□□□□ -1.9
URM1	YIL008W	STB4	P50104	949 aa		3.18	□□□□□ -1.9
URM1	YIL008W	UBA2	P52488	636 aa		3.18	□□□□□ -1.9
URM1	YIL008W	MAL11	P53048	616 aa		3.18	□□□□□ -1.9
URM1	YIL008W	NRG1	Q03125	231 aa		3.18	□□□□□ -1.9
URM1	YIL008W	YMR206W	Q03695	313 aa		3.18	□□□□□ -1.9
URM1	YIL008W	ADY4	Q05955	493 aa		3.18	□□□□□ -1.9
URM1	YIL008W	OMS1	Q06668	471 aa		3.18	□□□□□ -1.9
URM1	YIL008W	TAD3	Q9URQ3	322 aa		3.18	□□□□□ -1.9
URM1	YIL008W	MTC2	P34246	357 aa		3.17	□□□□□ -1.9
URM1	YIL008W	NUP82	P40368	713 aa		3.17	□□□□□ -1.9
URM1	YIL008W	TIM44	Q01852	431 aa		3.17	□□□□□ -1.9
URM1	YIL008W	CRR1	Q05790	422 aa		3.17	□□□□□ -1.9
URM1	YIL008W	MCH5	Q08777	521 aa		3.17	□□□□□ -1.9
URM1	YIL008W	GPR1	Q12361	961 aa		3.17	□□□□□ -1.9
URM1	YIL008W	MDM12	Q92328	271 aa		3.17	□□□□□ -1.9
URM1	YIL008W	STO1	P34160	861 aa	Known RBP	3.16	□□□□□ -1.9
URM1	YIL008W	PPS1	P38148	807 aa		3.16	□□□□□ -1.9
URM1	YIL008W	YBR053C	P38235	358 aa		3.16	□□□□□ -1.9
URM1	YIL008W	YBR259W	P38338	688 aa		3.16	□□□□□ -1.9
URM1	YIL008W	YIR042C	P40586	236 aa		3.16	□□□□□ -1.9
URM1	YIL008W	DAS1	P47005	663 aa		3.16	□□□□□ -1.9
URM1	YIL008W	MUK1	Q02866	612 aa		3.16	□□□□□ -1.9
URM1	YIL008W	TMN2	Q04562	672 aa		3.16	□□□□□ -1.9
URM1	YIL008W	YLR125W	Q12138	136 aa		3.16	□□□□□ -1.9
URM1	YIL008W	PHO8	P11491	566 aa		3.15	□□□□□ -1.91
URM1	YIL008W	GSY1	P23337	708 aa		3.15	□□□□□ -1.91
URM1	YIL008W	MCD4	P36051	919 aa		3.15	□□□□□ -1.91
URM1	YIL008W	SIC1	P38634	284 aa		3.15	□□□□□ -1.91
URM1	YIL008W	RPN10	P38886	268 aa	Known RBP	3.15	□□□□□ -1.91
URM1	YIL008W	CAF16	P43569	289 aa		3.15	□□□□□ -1.91
URM1	YIL008W	ASM4	Q05166	528 aa		3.15	□□□□□ -1.91
URM1	YIL008W	YDR338C	Q05497	695 aa		3.15	□□□□□ -1.91
URM1	YIL008W	TGL5	Q12043	749 aa		3.15	□□□□□ -1.91
URM1	YIL008W	CDC9	P04819	755 aa		3.14	□□□□□ -1.91
URM1	YIL008W	LAT1	P12695	482 aa	Known RBP	3.14	□□□□□ -1.91
URM1	YIL008W	YHL017W	P38745	532 aa		3.14	□□□□□ -1.91
URM1	YIL008W	OSW7	P43611	510 aa		3.14	□□□□□ -1.91
URM1	YIL008W	YJL163C	P46996	555 aa		3.14	□□□□□ -1.91
URM1	YIL008W	BNA2	P47125	453 aa		3.14	□□□□□ -1.91
URM1	YIL008W	YBP2	P53169	641 aa		3.14	□□□□□ -1.91
URM1	YIL008W	SNP1	Q00916	300 aa	Predicted RBP	3.14	□□□□□ -1.91
URM1	YIL008W	HBT1	Q07653	1046 aa	Known RBP	3.14	□□□□□ -1.91
URM1	YIL008W	ATG11	Q12527	1178 aa		3.14	□□□□□ -1.91
URM1	YIL008W	CIT2	P08679	460 aa		3.13	□□□□□ -1.91
URM1	YIL008W	VBA3	P25594	458 aa		3.13	□□□□□ -1.91
URM1	YIL008W	MSH2	P25847	964 aa		3.13	□□□□□ -1.91
URM1	YIL008W	THI4	P32318	326 aa		3.13	□□□□□ -1.91
URM1	YIL008W	DSS1	P39112	969 aa		3.13	□□□□□ -1.91
URM1	YIL008W	ECM1	P39715	212 aa		3.13	□□□□□ -1.91
URM1	YIL008W	HOS4	P40480	1083 aa		3.13	□□□□□ -1.91
URM1	YIL008W	YFL052W	P43551	465 aa		3.13	□□□□□ -1.91
URM1	YIL008W	STU2	P46675	888 aa		3.13	□□□□□ -1.91
URM1	YIL008W	PRP31	P49704	494 aa	Predicted RBP	3.13	□□□□□ -1.91
URM1	YIL008W	NPY1	P53164	384 aa		3.13	□□□□□ -1.91
URM1	YIL008W	TEX1	P53851	422 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 84.3 ms