RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	RPP2B	P02400	110 aa	Known RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	DBP5	P20449	482 aa	Known RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	SWI3	P32591	825 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	MAK5	P38112	773 aa	Predicted RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	CCT4	P39078	528 aa	Known RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	THI6	P41835	540 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	PEX21	P50091	288 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	ERG5	P54781	538 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	JIP4	Q03361	876 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	APL5	Q08951	932 aa	Known RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	SPO11	P23179	398 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	TIM23	P32897	222 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	PAN5	P38787	379 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	ALA1	P40825	983 aa	Known RBP	4.92	□□□□□ -1.62
PDR15	YDR406W	SML1	Q04964	104 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	MLH2	Q07980	695 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	MDM38	Q08179	573 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	BRF1	P29056	596 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	STV1	P37296	890 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	REV7	P38927	245 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	VFA1	P40080	203 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	VID30	P53076	958 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	PEX15	Q08215	383 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	SLX4	Q12098	748 aa		4.92	□□□□□ -1.62
PDR15	YDR406W	SNA3	P14359	133 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	YDJ1	P25491	409 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	BFA1	P47113	574 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	LIF1	P53150	421 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	CPR6	P53691	371 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	UGO1	Q03327	502 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	ATG23	Q06671	453 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	MET7	Q08645	548 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	GCD6	P32501	712 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	AIP1	P46680	615 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	YML083C	Q04526	418 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	ENT2	Q05785	613 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	ZRT2	Q12436	422 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	PGK1	P00560	416 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	ENO1	P00924	437 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	SPO12	P17123	173 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	PDC6	P26263	563 aa	Known RBP	4.91	□□□□□ -1.62
PDR15	YDR406W	NUP82	P40368	713 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	YML037C	Q03703	340 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	NUT2	Q06213	157 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
PDR15	YDR406W	KRS1	P15180	591 aa	Known RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	RPO26	P20435	155 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	VPS29	P38759	282 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	GPI8	P49018	411 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	YGR117C	P53270	476 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	YNL247W	P53852	767 aa	Known RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	NCS2	P53923	493 aa	Predicted RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	YNL058C	P53947	316 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	ERV41	Q04651	352 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	TSR2	Q06672	205 aa	Known RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	CWC2	Q12046	339 aa	Predicted RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	FIG2	P25653	1609 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	CDC8	P00572	216 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	PHO4	P07270	312 aa	Known RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	CLN3	P13365	580 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	CHS2	P14180	963 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	SSH4	P32343	579 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	TFC3	P34111	1160 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	MTC3	P53077	123 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	YMR114C	Q04471	368 aa	Known RBP	4.9	□□□□□ -1.62
PDR15	YDR406W	MCM16	Q12262	181 aa		4.9	□□□□□ -1.62
PDR15	YDR406W	FLO11	P08640	1367 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	PCK1	P10963	549 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	CKI1	P20485	582 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	ERG7	P38604	731 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	STR2	P47164	639 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	MAL13	P53338	473 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	OMS1	Q06668	471 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	CRD1	Q07560	283 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	FLO1	P32768	1537 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	FAS2	P19097	1887 aa	Known RBP	4.9	□□□□□ -1.63
PDR15	YDR406W	PHO8	P11491	566 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	PHO87	P25360	923 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	CNS1	P33313	385 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	UTP9	P38882	575 aa	Known RBP	4.9	□□□□□ -1.63
PDR15	YDR406W	YJL171C	P46992	396 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	PSP2	P50109	593 aa	Known RBP	4.9	□□□□□ -1.63
PDR15	YDR406W	YGR053C	P53234	283 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	NEW1	Q08972	1196 aa	Known RBP	4.9	□□□□□ -1.63
PDR15	YDR406W	RAD59	Q12223	238 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	PMD1	P32634	1753 aa		4.9	□□□□□ -1.63
PDR15	YDR406W	RAD18	P10862	487 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PDR15	YDR406W	KEL1	P38853	1164 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	TIF4631	P39935	952 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	NNF2	P53253	936 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	PHM6	Q05637	104 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	YOL075C	Q08234	1294 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	ARP6	Q12509	438 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	RAD27	P26793	382 aa		4.89	□□□□□ -1.63
PDR15	YDR406W	PHO88	P38264	188 aa	Predicted RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	RLP7	P40693	322 aa	Known RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	NOC3	Q07896	663 aa	Predicted RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	BRR1	Q99177	341 aa	Predicted RBP	4.89	□□□□□ -1.63
PDR15	YDR406W	ENO2	P00925	437 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms