RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W ASN1P49089 572 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W CTR1P49573 406 aa1.85□□□□□ -2.11
CFT1YDR301W VPS62P53285 467 aa1.85□□□□□ -2.11
CFT1YDR301W DIP5P53388 608 aa1.85□□□□□ -2.11
CFT1YDR301W NOP13P53883 403 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
CFT1YDR301W ERG5P54781 538 aa1.85□□□□□ -2.11
CFT1YDR301W YDR090CQ03193 310 aa1.85□□□□□ -2.11
CFT1YDR301W OXR1Q08952 273 aa1.85□□□□□ -2.11
CFT1YDR301W YLL058WQ12198 575 aa1.85□□□□□ -2.11
CFT1YDR301W MMP1Q12372 583 aa1.85□□□□□ -2.11
CFT1YDR301W PCD1Q12524 340 aa1.85□□□□□ -2.11
CFT1YDR301W RTP1Q12751 981 aa1.85□□□□□ -2.11
CFT1YDR301W PDR1P12383 1068 aa1.85□□□□□ -2.11
CFT1YDR301W TRK2P28584 889 aa1.85□□□□□ -2.11
CFT1YDR301W MET4P32389 672 aa1.85□□□□□ -2.11
CFT1YDR301W YEL043WP32618 956 aa1.85□□□□□ -2.11
CFT1YDR301W SKG6P32900 734 aaPredicted RBP1.85□□□□□ -2.11
CFT1YDR301W YET1P35723 206 aa1.85□□□□□ -2.11
CFT1YDR301W MRPL7P36519 292 aa1.85□□□□□ -2.11
CFT1YDR301W HMT1P38074 348 aa1.85□□□□□ -2.11
CFT1YDR301W PPS1P38148 807 aa1.85□□□□□ -2.11
CFT1YDR301W PPX1P38698 397 aa1.85□□□□□ -2.11
CFT1YDR301W BUD16P39988 312 aa1.85□□□□□ -2.11
CFT1YDR301W RPN3P40016 523 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W FIR1P40020 876 aa1.85□□□□□ -2.11
CFT1YDR301W MRX6P48564 524 aa1.85□□□□□ -2.11
CFT1YDR301W TIM8P57744 87 aa1.85□□□□□ -2.11
CFT1YDR301W YPL062WQ02781 134 aa1.85□□□□□ -2.11
CFT1YDR301W DOT1Q04089 582 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W SXM1Q04175 944 aaKnown RBP1.85□□□□□ -2.11
CFT1YDR301W MLH2Q07980 695 aa1.85□□□□□ -2.11
CFT1YDR301W TMA16Q08687 178 aa1.85□□□□□ -2.11
CFT1YDR301W OSW2Q12202 724 aa1.85□□□□□ -2.11
CFT1YDR301W AI5_BETAQ9ZZX0 354 aa1.85□□□□□ -2.11
CFT1YDR301W AI4P03878 556 aa1.84□□□□□ -2.11
CFT1YDR301W TPK1P06244 397 aa1.84□□□□□ -2.11
CFT1YDR301W MAS2P11914 482 aa1.84□□□□□ -2.11
CFT1YDR301W OM45P16547 393 aa1.84□□□□□ -2.11
CFT1YDR301W TUP1P16649 713 aa1.84□□□□□ -2.11
CFT1YDR301W CDC15P27636 974 aa1.84□□□□□ -2.11
CFT1YDR301W MRP4P32902 394 aa1.84□□□□□ -2.11
CFT1YDR301W SHM1P37292 490 aaPredicted RBP1.84□□□□□ -2.11
CFT1YDR301W PAM1P37304 830 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W EDS1P38073 919 aa1.84□□□□□ -2.11
CFT1YDR301W LDH1P38139 375 aa1.84□□□□□ -2.11
CFT1YDR301W YBR284WP38150 797 aa1.84□□□□□ -2.11
CFT1YDR301W RCK2P38623 610 aa1.84□□□□□ -2.11
CFT1YDR301W YEL023CP39992 682 aa1.84□□□□□ -2.11
CFT1YDR301W EAF5P39995 279 aa1.84□□□□□ -2.11
CFT1YDR301W ALD5P40047 520 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W KAP123P40069 1113 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W RPS7BP48164 190 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W PSP2P50109 593 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W LSC2P53312 427 aa1.84□□□□□ -2.11
CFT1YDR301W TRS130Q03660 1102 aa1.84□□□□□ -2.11
CFT1YDR301W YCG1Q06680 1035 aa1.84□□□□□ -2.11
CFT1YDR301W YPR078CQ06813 372 aa1.84□□□□□ -2.11
CFT1YDR301W YDL073WQ07454 984 aa1.84□□□□□ -2.11
CFT1YDR301W PUS1Q12211 544 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W ATG11Q12527 1178 aa1.84□□□□□ -2.11
CFT1YDR301W PAH1P32567 862 aa1.84□□□□□ -2.11
CFT1YDR301W MUD1P32605 298 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W TRM2P33753 639 aa1.84□□□□□ -2.11
CFT1YDR301W YEL1P34225 687 aa1.84□□□□□ -2.11
CFT1YDR301W ATG19P35193 415 aa1.84□□□□□ -2.11
CFT1YDR301W UIP5P36137 443 aa1.84□□□□□ -2.11
CFT1YDR301W MCX1P38323 520 aaPredicted RBP1.84□□□□□ -2.11
CFT1YDR301W UBX7P38349 436 aa1.84□□□□□ -2.11
CFT1YDR301W SAH1P39954 449 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W EFM4P40516 257 aa1.84□□□□□ -2.11
CFT1YDR301W SPO74P45819 413 aa1.84□□□□□ -2.11
CFT1YDR301W ENT3P47160 408 aa1.84□□□□□ -2.11
CFT1YDR301W BTN2P53286 410 aa1.84□□□□□ -2.11
CFT1YDR301W POB3Q04636 552 aaKnown RBP1.84□□□□□ -2.11
CFT1YDR301W AFT2Q08957 416 aa1.84□□□□□ -2.11
CFT1YDR301W PPR1P07272 904 aaPredicted RBP1.84□□□□□ -2.12
CFT1YDR301W WHI2P12611 486 aa1.84□□□□□ -2.12
CFT1YDR301W CKI1P20485 582 aa1.84□□□□□ -2.12
CFT1YDR301W DAL7P21826 554 aa1.84□□□□□ -2.12
CFT1YDR301W POT1P27796 417 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
CFT1YDR301W YHL026CP38740 315 aa1.84□□□□□ -2.12
CFT1YDR301W TOS3P43637 560 aa1.84□□□□□ -2.12
CFT1YDR301W AZR1P50080 613 aa1.84□□□□□ -2.12
CFT1YDR301W FOL2P51601 243 aaKnown RBP1.84□□□□□ -2.12
CFT1YDR301W YGR021WP53212 290 aa1.84□□□□□ -2.12
CFT1YDR301W SSL2Q00578 843 aa1.84□□□□□ -2.12
CFT1YDR301W UTP14Q04500 899 aaKnown RBP1.84□□□□□ -2.12
CFT1YDR301W VPS38Q05919 439 aa1.84□□□□□ -2.12
CFT1YDR301W SDH5Q08230 162 aa1.84□□□□□ -2.12
CFT1YDR301W TRP2P00899 507 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W ASP3-2P0CX77 362 aa1.83□□□□□ -2.12
CFT1YDR301W ASP3-3P0CX78 362 aa1.83□□□□□ -2.12
CFT1YDR301W ASP3-4P0CX79 362 aa1.83□□□□□ -2.12
CFT1YDR301W ASP3-1P0CZ17 362 aa1.83□□□□□ -2.12
CFT1YDR301W HAP4P14064 554 aa1.83□□□□□ -2.12
CFT1YDR301W VPH1P32563 840 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W GCG1P32656 232 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W EAP1P36041 632 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W RRP14P36080 434 aaKnown RBP1.83□□□□□ -2.12
CFT1YDR301W MIC60P36112 540 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms