RNA–Protein interactions for RNA: YDR265W

PEX10, Transcript of Peroxisomal membrane E3 ubiquitin ligase, yeast

Gene PEX10, Length 1,014 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX10	YDR265W	RPS0B	P46654	252 aa	Known RBP	4.27	□□□□□ -1.73
PEX10	YDR265W	DUS1	P53759	423 aa	Known RBP	4.27	□□□□□ -1.73
PEX10	YDR265W	DOS2	P54858	310 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	ADY4	Q05955	493 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	ENV7	Q12003	364 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	YOR022C	Q12204	715 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	OSH2	Q12451	1283 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	YTA7	P40340	1379 aa		4.27	□□□□□ -1.73
PEX10	YDR265W	PRC1	P00729	532 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	TOP3	P13099	656 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	NGG1	P32494	702 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	SAP190	P36123	1033 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	SAK1	P38990	1142 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	ATF1	P40353	525 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	SDS3	P40505	327 aa		4.26	□□□□□ -1.73
PEX10	YDR265W	NOG2	P53742	486 aa	Known RBP	4.26	□□□□□ -1.73
PEX10	YDR265W	NAN1	Q02931	896 aa	Known RBP	4.26	□□□□□ -1.73
PEX10	YDR265W	MRH1	Q12117	320 aa	Predicted RBP	4.26	□□□□□ -1.73
PEX10	YDR265W	SSY5	P47002	699 aa		4.25	□□□□□ -1.73
PEX10	YDR265W	YJR008W	P47085	338 aa		4.25	□□□□□ -1.73
PEX10	YDR265W	ASI2	P53895	289 aa		4.25	□□□□□ -1.73
PEX10	YDR265W	MUS81	Q04149	632 aa	Predicted RBP	4.25	□□□□□ -1.73
PEX10	YDR265W	SSF2	Q12153	453 aa	Predicted RBP	4.25	□□□□□ -1.73
PEX10	YDR265W	YCL002C	P25565	263 aa		4.24	□□□□□ -1.73
PEX10	YDR265W	CUE2	P36075	443 aa	Known RBP	4.24	□□□□□ -1.73
PEX10	YDR265W	PCL5	P38794	229 aa		4.24	□□□□□ -1.73
PEX10	YDR265W	YJL163C	P46996	555 aa		4.24	□□□□□ -1.73
PEX10	YDR265W	AMA1	P50082	593 aa		4.24	□□□□□ -1.73
PEX10	YDR265W	BDF2	Q07442	638 aa		4.24	□□□□□ -1.73
PEX10	YDR265W	RAD4	P14736	754 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	HSP60	P19882	572 aa	Known RBP	4.23	□□□□□ -1.73
PEX10	YDR265W	PEX2	P32800	271 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	TAD1	P53065	400 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	YGR125W	P53273	1036 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	NRG1	Q03125	231 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	LRS4	Q04087	347 aa	Known RBP	4.23	□□□□□ -1.73
PEX10	YDR265W	RSC3	Q06639	885 aa		4.23	□□□□□ -1.73
PEX10	YDR265W	BUD21	Q08492	214 aa	Predicted RBP	4.23	□□□□□ -1.73
PEX10	YDR265W	HIS7	P33734	552 aa	Known RBP	4.22	□□□□□ -1.73
PEX10	YDR265W	YBR053C	P38235	358 aa		4.22	□□□□□ -1.73
PEX10	YDR265W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
PEX10	YDR265W	YDL124W	Q07551	312 aa	Known RBP	4.22	□□□□□ -1.73
PEX10	YDR265W	YLR415C	O13578	112 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	TOM70	P07213	617 aa	Known RBP	4.21	□□□□□ -1.74
PEX10	YDR265W	CDC43	P18898	376 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	TDP1	P38319	544 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	YIR042C	P40586	236 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	HUL4	P40985	892 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	UBP6	P43593	499 aa	Known RBP	4.21	□□□□□ -1.74
PEX10	YDR265W	IRC13	Q08630	104 aa		4.21	□□□□□ -1.74
PEX10	YDR265W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PEX10	YDR265W	CIT1	P00890	479 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	CBR1	P38626	284 aa	Known RBP	4.2	□□□□□ -1.74
PEX10	YDR265W	OCA5	P38738	679 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	PFA3	P42836	336 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	GYP8	P43570	497 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	TIM54	P47045	478 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	DAM1	P53267	343 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	YDR514C	Q04408	483 aa		4.2	□□□□□ -1.74
PEX10	YDR265W	GFA1	P14742	717 aa	Known RBP	4.19	□□□□□ -1.74
PEX10	YDR265W	KIN3	P22209	435 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	TOA1	P32773	286 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	PPZ2	P33329	710 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	GGA2	P38817	585 aa	Known RBP	4.19	□□□□□ -1.74
PEX10	YDR265W	SHR5	P41912	237 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	YGR283C	P53336	341 aa	Predicted RBP	4.19	□□□□□ -1.74
PEX10	YDR265W	RIA1	P53893	1110 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	SUT2	Q12286	268 aa		4.19	□□□□□ -1.74
PEX10	YDR265W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
PEX10	YDR265W	EMC3	P36039	253 aa		4.18	□□□□□ -1.74
PEX10	YDR265W	EBP2	P36049	427 aa	Known RBP	4.18	□□□□□ -1.74
PEX10	YDR265W	MTR3	P48240	250 aa	Predicted RBP	4.18	□□□□□ -1.74
PEX10	YDR265W	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
PEX10	YDR265W	TGL5	Q12043	749 aa		4.18	□□□□□ -1.74
PEX10	YDR265W	LAT1	P12695	482 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	HCA4	P20448	770 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	NMD2	P38798	1089 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	SET5	P38890	526 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	ZDS1	P50111	915 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	VPS73	P53142	486 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	CWC22	P53333	577 aa	Known RBP	4.17	□□□□□ -1.74
PEX10	YDR265W	REH1	Q06709	432 aa		4.17	□□□□□ -1.74
PEX10	YDR265W	FLC1	Q08967	793 aa		4.17	□□□□□ -1.74
PEX10	YDR265W	SSL2	Q00578	843 aa		4.16	□□□□□ -1.74
PEX10	YDR265W	TAF8	Q03750	510 aa		4.16	□□□□□ -1.74
PEX10	YDR265W	ASM4	Q05166	528 aa		4.16	□□□□□ -1.74
PEX10	YDR265W	FPR4	Q06205	392 aa	Predicted RBP	4.16	□□□□□ -1.74
PEX10	YDR265W	NDJ1	Q12366	352 aa		4.16	□□□□□ -1.74
PEX10	YDR265W	HIF1	Q12373	385 aa		4.16	□□□□□ -1.74
PEX10	YDR265W	TOM20	P35180	183 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	BCD1	P38772	366 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	ALG2	P43636	503 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	TAH11	P47112	604 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	SGO1	Q08490	590 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	MET7	Q08645	548 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	THI21	Q08975	551 aa		4.15	□□□□□ -1.75
PEX10	YDR265W	BNR1	P40450	1375 aa		4.14	□□□□□ -1.75
PEX10	YDR265W	DIF1	O13577	133 aa		4.14	□□□□□ -1.75
PEX10	YDR265W	MET6	P05694	767 aa	Known RBP	4.14	□□□□□ -1.75
PEX10	YDR265W	PER1	P25625	357 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms