RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W NUR1Q12066 484 aa4.42□□□□□ -1.7
TRS85YDR108W ATP16Q12165 160 aa4.42□□□□□ -1.7
TRS85YDR108W ACF2Q12168 779 aa4.42□□□□□ -1.7
TRS85YDR108W TAF3Q12297 353 aa4.42□□□□□ -1.7
TRS85YDR108W SNU66Q12420 587 aaPredicted RBP4.42□□□□□ -1.7
TRS85YDR108W YBL111CQ3E7Y5 667 aa4.42□□□□□ -1.7
TRS85YDR108W YBT1P32386 1661 aa4.42□□□□□ -1.7
TRS85YDR108W ENO1P00924 437 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W GCN3P14741 305 aa4.42□□□□□ -1.7
TRS85YDR108W TRM1P15565 570 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W PRP6P19735 899 aaPredicted RBP4.42□□□□□ -1.7
TRS85YDR108W UBA1P22515 1024 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W PHO3P24031 467 aa4.42□□□□□ -1.7
TRS85YDR108W RDS1P25611 832 aa4.42□□□□□ -1.7
TRS85YDR108W PYC2P32327 1180 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W SRP40P32583 406 aaPredicted RBP4.42□□□□□ -1.7
TRS85YDR108W SLA1P32790 1244 aa4.42□□□□□ -1.7
TRS85YDR108W MRT4P33201 236 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W CNS1P33313 385 aa4.42□□□□□ -1.7
TRS85YDR108W DUR3P33413 735 aa4.42□□□□□ -1.7
TRS85YDR108W HEK2P38199 381 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
TRS85YDR108W YHL012WP38709 493 aa4.42□□□□□ -1.7
TRS85YDR108W AIM9P40053 627 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W BRO1P48582 844 aa4.42□□□□□ -1.7
TRS85YDR108W MCM6P53091 1017 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W COA4Q05809 96 aa4.42□□□□□ -1.7
TRS85YDR108W VPS38Q05919 439 aa4.42□□□□□ -1.7
TRS85YDR108W NOP6Q07623 225 aaKnown RBP4.42□□□□□ -1.7
TRS85YDR108W YOR352WQ08816 343 aa4.42□□□□□ -1.7
TRS85YDR108W UIP4Q08926 304 aa4.42□□□□□ -1.7
TRS85YDR108W CDC8P00572 216 aa4.41□□□□□ -1.7
TRS85YDR108W LPD1P09624 499 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W VMA2P16140 517 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W TPM1P17536 199 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W CNA1P23287 553 aa4.41□□□□□ -1.7
TRS85YDR108W CLB3P24870 427 aa4.41□□□□□ -1.7
TRS85YDR108W HSP30P25619 332 aa4.41□□□□□ -1.7
TRS85YDR108W KIP2P28743 706 aa4.41□□□□□ -1.7
TRS85YDR108W SMY1P32364 656 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W SMI1P32566 505 aa4.41□□□□□ -1.7
TRS85YDR108W PTR2P32901 601 aa4.41□□□□□ -1.7
TRS85YDR108W SMC1P32908 1225 aa4.41□□□□□ -1.7
TRS85YDR108W SAS3P34218 831 aa4.41□□□□□ -1.7
TRS85YDR108W PGM2P37012 569 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W MNN2P38069 597 aa4.41□□□□□ -1.7
TRS85YDR108W SMF1P38925 575 aa4.41□□□□□ -1.7
TRS85YDR108W MKT1P40850 830 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W GNP1P48813 663 aa4.41□□□□□ -1.7
TRS85YDR108W UBP15P50101 1230 aa4.41□□□□□ -1.7
TRS85YDR108W SPO1P53541 631 aa4.41□□□□□ -1.7
TRS85YDR108W HFD1Q04458 532 aa4.41□□□□□ -1.7
TRS85YDR108W OPY2Q06810 360 aa4.41□□□□□ -1.7
TRS85YDR108W MDM36Q06820 579 aa4.41□□□□□ -1.7
TRS85YDR108W OSW1Q08692 278 aa4.41□□□□□ -1.7
TRS85YDR108W GPN2Q08726 347 aaPredicted RBP4.41□□□□□ -1.7
TRS85YDR108W YPL277CQ08989 487 aa4.41□□□□□ -1.7
TRS85YDR108W CDC53Q12018 815 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W YLR125WQ12138 136 aa4.41□□□□□ -1.7
TRS85YDR108W RIB2Q12362 591 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W TEF1P02994 458 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W REC107P21651 314 aa4.41□□□□□ -1.7
TRS85YDR108W OPI1P21957 404 aa4.41□□□□□ -1.7
TRS85YDR108W TFC4P33339 1025 aa4.41□□□□□ -1.7
TRS85YDR108W UGA2P38067 497 aa4.41□□□□□ -1.7
TRS85YDR108W MRX3P38172 270 aa4.41□□□□□ -1.7
TRS85YDR108W YNG2P38806 282 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W PCF11P39081 626 aaPredicted RBP4.41□□□□□ -1.7
TRS85YDR108W PES4P39684 611 aa4.41□□□□□ -1.7
TRS85YDR108W SNL1P40548 159 aa4.41□□□□□ -1.7
TRS85YDR108W ENT3P47160 408 aa4.41□□□□□ -1.7
TRS85YDR108W RIM21P48565 533 aa4.41□□□□□ -1.7
TRS85YDR108W MRM2P53123 320 aa4.41□□□□□ -1.7
TRS85YDR108W RNH70P53331 553 aa4.41□□□□□ -1.7
TRS85YDR108W CEG1Q01159 459 aaPredicted RBP4.41□□□□□ -1.7
TRS85YDR108W SLU7Q02775 382 aaKnown RBP4.41□□□□□ -1.7
TRS85YDR108W TAF12Q03761 539 aa4.41□□□□□ -1.7
TRS85YDR108W DYN3Q04949 312 aa4.41□□□□□ -1.7
TRS85YDR108W SEC10Q06245 871 aa4.41□□□□□ -1.7
TRS85YDR108W MCM21Q06675 368 aa4.41□□□□□ -1.7
TRS85YDR108W YOL057WQ08225 711 aa4.41□□□□□ -1.7
TRS85YDR108W RMP1Q12530 201 aa4.41□□□□□ -1.7
TRS85YDR108W YSP2Q06681 1438 aa4.4□□□□□ -1.7
TRS85YDR108W ADY2P25613 283 aa4.4□□□□□ -1.71
TRS85YDR108W TPS2P31688 896 aaKnown RBP4.4□□□□□ -1.71
TRS85YDR108W SIN4P32259 974 aa4.4□□□□□ -1.71
TRS85YDR108W SSE1P32589 693 aaKnown RBP4.4□□□□□ -1.71
TRS85YDR108W IXR1P33417 597 aa4.4□□□□□ -1.71
TRS85YDR108W SQT1P35184 431 aa4.4□□□□□ -1.71
TRS85YDR108W YKL063CP35725 167 aa4.4□□□□□ -1.71
TRS85YDR108W MIA40P36046 403 aa4.4□□□□□ -1.71
TRS85YDR108W UIP5P36137 443 aa4.4□□□□□ -1.71
TRS85YDR108W PSY4P38193 441 aa4.4□□□□□ -1.71
TRS85YDR108W STN1P38960 494 aa4.4□□□□□ -1.71
TRS85YDR108W HXT6P39003 570 aaKnown RBP4.4□□□□□ -1.71
TRS85YDR108W HXT7P39004 570 aa4.4□□□□□ -1.71
TRS85YDR108W PDS1P40316 373 aaPredicted RBP4.4□□□□□ -1.71
TRS85YDR108W IRR1P40541 1150 aa4.4□□□□□ -1.71
TRS85YDR108W NOP9P47077 666 aaKnown RBP4.4□□□□□ -1.71
TRS85YDR108W YPT11P48559 417 aa4.4□□□□□ -1.71
TRS85YDR108W CTF18P49956 741 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms